RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CHI3L2Q15782 390 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 MYLK3Q32MK0 819 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 AFTPHQ6ULP2 937 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 ADIPOR2Q86V24 386 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 CEP97Q8IW35 865 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 RYBPQ8N488 228 aaPredicted RBP16.76■□□□□ 0.27
CLCF1-201ENST00000312438 PCDH20Q8N6Y1 951 aaKnown RBP16.76■□□□□ 0.27
CLCF1-201ENST00000312438 EFHBQ8N7U6 833 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLCF1-201ENST00000312438 OR6K2Q8NGY2 324 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 TSPAN17Q96FV3 270 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 TUBGCP5Q96RT8 1024 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 GDF15Q99988 308 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.76■□□□□ 0.27
CLCF1-201ENST00000312438 COPG2Q9UBF2 871 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 FBXO10Q9UK96 956 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 VWA7Q9Y334 891 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 A0A087X1B8 175 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 STX7O15400 261 aaKnown RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 TGDSO95455 350 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 APOA4P06727 396 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 TROVE2P10155 538 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 CPA3P15088 417 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 HOXB8P17481 243 aaPredicted RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 PMLP29590 882 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 SERPINA4P29622 427 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 ALDH3A1P30838 453 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 ACCSLQ4AC99 568 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 LDB1Q86U70 411 aaPredicted RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 AHI1Q8N157 1196 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 TTC30BQ8N4P2 665 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 PPP1R14CQ8TAE6 165 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 SMIM14Q96QK8 99 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 C1QTNF1Q9BXJ1 281 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 IGFLR1Q9H665 355 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 CORO1CQ9ULV4 474 aaPredicted RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 RUVBL2Q9Y230 463 aaKnown RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 ATXN2Q99700 1313 aaKnown RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 EPOPA6NHQ4 379 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 CCT8L1PA6NM43 557 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 POP4O95707 220 aaKnown RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 POLR2EP19388 210 aaKnown RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 HMGCLP35914 325 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 GMPRP36959 345 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 VIPR2P41587 438 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 RAD51Q06609 339 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 BST1Q10588 318 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 STX3Q13277 289 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 CARD16Q5EG05 197 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 FAM78AQ5JUQ0 283 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 RARS2Q5T160 578 aaKnown RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 HECTD2Q5U5R9 776 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 MBLAC2Q68D91 279 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 C22orf39Q6P5X5 142 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 CCDC91Q7Z6B0 441 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 NPAS3Q8IXF0 933 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 NAT16Q8N8M0 369 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 BPIFB1Q8TDL5 484 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 SMARCD2Q92925 531 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 MRPL38Q96DV4 380 aaKnown RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 C7orf26Q96N11 449 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 ASB16Q96NS5 453 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 TCF12Q99081 682 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 CPEB1Q9BZB8 566 aaKnown RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 INTS10Q9NVR2 710 aaKnown RBP16.75■□□□□ 0.27
CLCF1-201ENST00000312438 GDE1Q9NZC3 331 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 MID2Q9UJV3 735 aa16.75■□□□□ 0.27
CLCF1-201ENST00000312438 H7C0S8 307 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 KLHL2O95198 593 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 PIGNO95427 931 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 GKP32189 559 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 PCLAFQ15004 111 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 TYSND1Q2T9J0 566 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 RBM20Q5T481 1227 aaKnown RBP16.74■□□□□ 0.27
CLCF1-201ENST00000312438 TMEM184AQ6ZMB5 413 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 CCDC121Q6ZUS5 278 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 GPR149Q86SP6 731 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 PLPP6Q8IY26 295 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 PAF1Q8N7H5 531 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 FGF13Q92913 245 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 ABHD8Q96I13 439 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 NDNQ99608 321 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 C19orf43Q9BQ61 176 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 TRIM55Q9BYV6 548 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 GPR63Q9BZJ6 419 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 THAP1Q9NVV9 213 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 SLCO3A1Q9UIG8 710 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 PKP3Q9Y446 797 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 ZNF711Q9Y462 761 aa16.74■□□□□ 0.27
CLCF1-201ENST00000312438 A0A0J9YYE9 177 aa16.73■□□□□ 0.27
CLCF1-201ENST00000312438 ADH1CP00326 375 aa16.73■□□□□ 0.27
CLCF1-201ENST00000312438 TRBC1P01850 177 aa16.73■□□□□ 0.27
CLCF1-201ENST00000312438 CTPS1P17812 591 aa16.73■□□□□ 0.27
CLCF1-201ENST00000312438 KCNA4P22459 653 aa16.73■□□□□ 0.27
CLCF1-201ENST00000312438 GRK2P25098 689 aa16.73■□□□□ 0.27
CLCF1-201ENST00000312438 NNMTP40261 264 aa16.73■□□□□ 0.27
CLCF1-201ENST00000312438 STC1P52823 247 aa16.73■□□□□ 0.27
CLCF1-201ENST00000312438 TSNAXIP1Q2TAA8 658 aa16.73■□□□□ 0.27
CLCF1-201ENST00000312438 EML3Q32P44 896 aa16.73■□□□□ 0.27
CLCF1-201ENST00000312438 RNF187Q5TA31 235 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms