RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 MDM1Q8TC05 714 aa22.59■■□□□ 1.21
IRF3-201ENST00000309877 PPM1EQ8WY54 764 aa22.59■■□□□ 1.21
IRF3-201ENST00000309877 VOPP1Q96AW1 172 aa22.59■■□□□ 1.21
IRF3-201ENST00000309877 CHFRQ96EP1 664 aa22.59■■□□□ 1.21
IRF3-201ENST00000309877 SERAC1Q96JX3 654 aa22.59■■□□□ 1.21
IRF3-201ENST00000309877 KLHL32Q96NJ5 620 aa22.59■■□□□ 1.21
IRF3-201ENST00000309877 KLF6Q99612 283 aaPredicted RBP22.59■■□□□ 1.21
IRF3-201ENST00000309877 IL36AQ9UHA7 158 aa22.59■■□□□ 1.21
IRF3-201ENST00000309877 TMEM120BA0PK00 339 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 SPAG7O75391 227 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 HNF1BP35680 557 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 SOX9P48436 509 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 POLR2LP62875 67 aaKnown RBP22.58■■□□□ 1.21
IRF3-201ENST00000309877 DNAJC3Q13217 504 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 CTBP1Q13363 440 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 ZNF234Q14588 700 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 ARSIQ5FYB1 569 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 ZSWIM9Q86XI8 627 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 DENND6AQ8IWF6 608 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 TTC30BQ8N4P2 665 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 ALKBH8Q96BT7 664 aaKnown RBP22.58■■□□□ 1.21
IRF3-201ENST00000309877 CDKN2AIPNLQ96HQ2 116 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 CDX2Q99626 313 aaPredicted RBP22.58■■□□□ 1.21
IRF3-201ENST00000309877 OSBPL1AQ9BXW6 950 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 SUDS3Q9H7L9 328 aaPredicted RBP22.58■■□□□ 1.21
IRF3-201ENST00000309877 SMG5Q9UPR3 1016 aaKnown RBP22.58■■□□□ 1.21
IRF3-201ENST00000309877 PKP3Q9Y446 797 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 WASF2Q9Y6W5 498 aa22.58■■□□□ 1.21
IRF3-201ENST00000309877 EDDM13A0A1B0GTR0 161 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 HMX2A2RU54 273 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 GOLGA8RI6L899 631 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 LEFTY1O75610 366 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 SLC1A2P43004 574 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 LIMK2P53671 638 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 SERPINA13PQ6UXR4 307 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 KIAA0408Q6ZU52 694 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 USP45Q70EL2 814 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 LMNTD2Q8IXW0 634 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 C2CD4AQ8NCU7 369 aaPredicted RBP22.58■■□□□ 1.2
IRF3-201ENST00000309877 ATXN7L3BQ96GX2 97 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 LRIG1Q96JA1 1093 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 CAPS2Q9BXY5 557 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 POLR3BQ9NW08 1133 aaPredicted RBP22.58■■□□□ 1.2
IRF3-201ENST00000309877 FBXO5Q9UKT4 447 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 ANKRD36A6QL64 1941 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 SZT2Q5T011 3432 aa22.58■■□□□ 1.2
IRF3-201ENST00000309877 CCDC162PA2VCL2 907 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 CAPN8A6NHC0 703 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 GOT2P00505 430 aaKnown RBP22.57■■□□□ 1.2
IRF3-201ENST00000309877 F7P08709 466 aaPredicted RBP22.57■■□□□ 1.2
IRF3-201ENST00000309877 PYGBP11216 843 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 HLA-EP13747 358 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 HADHAP40939 763 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 HNRNPA1L2Q32P51 320 aaKnown RBP22.57■■□□□ 1.2
IRF3-201ENST00000309877 BRAT1Q6PJG6 821 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 TIFABQ6ZNK6 161 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 LYSMD3Q7Z3D4 306 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 PLCD3Q8N3E9 789 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 ANKRD42Q8N9B4 389 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 OR4L1Q8NH43 312 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 ZFYVE1Q9HBF4 777 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 SSU72Q9NP77 194 aaKnown RBP22.57■■□□□ 1.2
IRF3-201ENST00000309877 NKIRAS1Q9NYS0 192 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 LIMD1Q9UGP4 676 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 COL4A3Q01955 1670 aa22.57■■□□□ 1.2
IRF3-201ENST00000309877 C1orf232A0A0U1RR37 186 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 OR51F1A6NGY5 319 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 FAM47DPA6NHR8 397 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 PRPF4O43172 522 aaKnown RBP eCLIP22.56■■□□□ 1.21e-6■■□□□ 14
IRF3-201ENST00000309877 AHSGP02765 367 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 BMP1P13497 986 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 CHN1P15882 459 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 MDH1P40925 334 aaKnown RBP22.56■■□□□ 1.2
IRF3-201ENST00000309877 GALK1P51570 392 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 MPP1Q00013 466 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 PRPF38BQ5VTL8 546 aaKnown RBP22.56■■□□□ 1.2
IRF3-201ENST00000309877 FSTL4Q6MZW2 842 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 MRNIPQ6NTE8 343 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 SPOCK2Q92563 424 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 SCRN2Q96FV2 425 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 P2RY13Q9BPV8 354 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 RHOJQ9H4E5 214 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 BPIFA1Q9NP55 256 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 THAP10Q9P2Z0 257 aaPredicted RBP22.56■■□□□ 1.2
IRF3-201ENST00000309877 PPIL1Q9Y3C6 166 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 C5orf42Q9H799 3197 aa22.56■■□□□ 1.2
IRF3-201ENST00000309877 A0A0U1RQS6 177 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 A6NNZ2 444 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 RFPL1O75677 317 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 PSMA3P25788 255 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 HMGCLP35914 325 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 ABCG1P45844 678 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 GUCY1A3Q02108 690 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 TUBB8Q3ZCM7 444 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 AFTPHQ6ULP2 937 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 MICALCLQ6ZW33 695 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 Q7L0L9 218 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 SUGP1Q8IWZ8 645 aaKnown RBP22.55■■□□□ 1.2
IRF3-201ENST00000309877 VPS39Q96JC1 886 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 PHF7Q9BWX1 381 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms