RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PTK2BQ14289 1009 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 FASTKQ14296 549 aaKnown RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 AAGABQ6PD74 315 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 LINGO4Q6UY18 593 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 PTGR2Q8N8N7 351 aaPredicted RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 CINPQ9BW66 212 aaPredicted RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 MRPL1Q9BYD6 325 aaKnown RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 KLHL4Q9C0H6 718 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 COPS7BQ9H9Q2 264 aaPredicted RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 BPIFA1Q9NP55 256 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 TMEM161AQ9NX61 479 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 PCDHGC4Q9Y5F7 938 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 ANKRD12Q6UB98 2062 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 GOLGA8CPA6NN73 597 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 UBXN8O00124 270 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 SLC7A4O43246 635 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 CSPG5O95196 566 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 ATXN1LP0C7T5 689 aaKnown RBP11.57□□□□□ -0.56
PTPN2-201ENST00000309660 OR1D2P34982 312 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 SEMA3AQ14563 771 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 MRNIPQ6NTE8 343 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 FAM117BQ6P1L5 589 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 ZNF683Q8IZ20 524 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 LPCAT1Q8NF37 534 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 PTERQ96BW5 349 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 SCLYQ96I15 445 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 CNDP1Q96KN2 507 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 LRGUKQ96M69 825 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 SLC39A3Q9BRY0 314 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 OLA1Q9NTK5 396 aaKnown RBP11.57□□□□□ -0.56
PTPN2-201ENST00000309660 PCDH10Q9P2E7 1040 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 TRAF6Q9Y4K3 522 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 PRRC2BQ5JSZ5 2229 aaKnown RBP11.57□□□□□ -0.56
PTPN2-201ENST00000309660 MYO16Q9Y6X6 1858 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 WASH4PA8MWX3 477 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 MAP3K13O43283 966 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 NPHS1O60500 1241 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 RHOBTB1O94844 696 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 SLC6A4P31645 630 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 DPP6P42658 865 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 RGRP47804 291 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 TM4SF4P48230 202 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 CCL23P55773 120 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 MS4A2Q01362 244 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 PARP15Q460N3 678 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 DEFB128Q7Z7B8 93 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 LCA5Q86VQ0 697 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 BBS5Q8N3I7 341 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 GALNT4Q8N4A0 578 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 OR4K2Q8NGD2 314 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 ESAMQ96AP7 390 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 ARNT2Q9HBZ2 717 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 ATP13A1Q9HD20 1204 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 STK39Q9UEW8 545 aa11.57□□□□□ -0.56
PTPN2-201ENST00000309660 MAGEA13PA6NCF6 341 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 SUPT3HB4E1H0 165 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 SUPT3HO75486 399 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 CRCPO75575 148 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 PAX3P23760 479 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 PRDX6P30041 224 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 ATP5C1P36542 298 aaKnown RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 CSRP3P50461 194 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 ATN1P54259 1190 aaPredicted RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 PFKPQ01813 784 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 FAM26DQ5JW98 314 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 CYP2R1Q6VVX0 501 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 KLHDC8BQ8IXV7 354 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 DCBLD1Q8N8Z6 715 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 NSUN5Q96P11 429 aaKnown RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 TUBGCP5Q96RT8 1024 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 PCDHAC1Q9H158 963 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 MUC3BQ9H195 1237 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 MFSD1Q9H3U5 465 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 MID1IP1Q9NPA3 183 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 CATSPERZQ9NTU4 200 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 UTP6Q9NYH9 597 aaKnown RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 COMMD10Q9Y6G5 202 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 A6NHS1 94 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 OR6C75A6NL08 312 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 PSMD12O00232 456 aaPredicted RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 ENPP3O14638 875 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 PQBP1O60828 265 aaKnown RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 NBNO60934 754 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 CA8P35219 290 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 GNA12Q03113 381 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 MED21Q13503 144 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 ACAP2Q15057 778 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 PITRM1Q5JRX3 1037 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 SPOUT1Q5T280 376 aaKnown RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 GLT6D1Q7Z4J2 308 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 ISCA2Q86U28 154 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 OR4L1Q8NH43 312 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 SPPL2BQ8TCT7 592 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 CCDC126Q96EE4 140 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 SLC45A3Q96JT2 553 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 KCNA7Q96RP8 456 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 MARCH5Q9NX47 278 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 BTRCQ9Y297 605 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 MYLKQ15746 1914 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 CCDC189A1A4V9 331 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms