RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ELMSAN1Q6PJG2 1045 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 CNSTQ6PJW8 725 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 CCDC121Q6ZUS5 278 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 TRPM8Q7Z2W7 1104 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 GRASPQ7Z6J2 395 aaPredicted RBP11.92□□□□□ -0.5
TRIM40-205ENST00000307859 ADGRD2Q7Z7M1 963 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 LPCAT1Q8NF37 534 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 RMDN1Q96DB5 314 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 TBATAQ96M53 351 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 PHOX2BQ99453 314 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 FBXO6Q9NRD1 293 aaPredicted RBP11.92□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF358Q9NW07 568 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 TBC1D14Q9P2M4 693 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 COPG2Q9UBF2 871 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 PRDM4Q9UKN5 801 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 KIAA1549LQ6ZVL6 1849 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 ZDBF2Q9HCK1 2354 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 PLXNB3Q9ULL4 1909 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 CCDC195A0A1B0GUA6 201 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 CCDC162PA2VCL2 907 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 GRXCR2A6NFK2 248 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 ANKRD66B4E2M5 251 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 K7ERQ8 282 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 CCL22O00626 93 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 PHGDHO43175 533 aaKnown RBP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 S1PR4O95977 384 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 GOT2P00505 430 aaKnown RBP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 APOA4P06727 396 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 TROVE2P10155 538 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 FGF3P11487 239 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 STMN1P16949 149 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 CEBPBP17676 345 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 OGNP20774 298 aaKnown RBP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 CRABP2P29373 138 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 HLA-FP30511 346 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 TAS2R39P59534 338 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 IRX4P78413 519 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 TMPRSS15P98073 1019 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF789Q5FWF6 425 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 PITRM1Q5JRX3 1037 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 ATXN7L2Q5T6C5 722 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 ERMP1Q7Z2K6 904 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 GLT6D1Q7Z4J2 308 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 PTAR1Q7Z6K3 402 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 TMEM25Q86YD3 366 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 CEP97Q8IW35 865 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 OTUD6BQ8N6M0 293 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF557Q8N988 423 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 MDGA1Q8NFP4 955 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 OR13C4Q8NGS5 318 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 OR6P1Q8NGX9 317 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 SCG3Q8WXD2 468 aaKnown RBP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 OTUB2Q96DC9 234 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 RMDN2Q96LZ7 410 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 ABCF3Q9NUQ8 709 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 HACD3Q9P035 362 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 MARCH4Q9P2E8 410 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 TLK1Q9UKI8 766 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 CORO1CQ9ULV4 474 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-205ENST00000307859 USH1CQ9Y6N9 552 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 XIRP2A4UGR9 3374 aa11.91□□□□□ -0.5
TRIM40-205ENST00000307859 DOCK8Q8NF50 2099 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 OR51F1A6NGY5 319 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 CD3EAPO15446 510 aaKnown RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 SMAD6O43541 496 aaKnown RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 BUD23O43709 281 aaKnown RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF821O75541 412 aaPredicted RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 GLP2RO95838 553 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 CPA3P15088 417 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 MAPK8P45983 427 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 GRIA4P48058 902 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 RPL26P61254 145 aaKnown RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 CCDC15Q0P6D6 951 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 PTPRCAPQ14761 206 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 DUSP6Q16828 381 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 TYSND1Q2T9J0 566 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 RBM20Q5T481 1227 aaKnown RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 RNF187Q5TA31 235 aaPredicted RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 PTCRAQ6ISU1 281 aaPredicted RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 RAPH1Q70E73 1250 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 CENPLQ8N0S6 344 aaPredicted RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 TTC30BQ8N4P2 665 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 KIAA1958Q8N8K9 716 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 GPATCH11Q8N954 259 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 OR6Y1Q8NGX8 325 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 RDH11Q8TC12 318 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 IRF7Q92985 503 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 MYO19Q96H55 970 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 CDKN2AIPNLQ96HQ2 116 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 ELMO2Q96JJ3 720 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 ZSWIM3Q96MP5 696 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 OMDQ99983 421 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 TRIM55Q9BYV6 548 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 TM6SF2Q9BZW4 377 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 SUDS3Q9H7L9 328 aaPredicted RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 NMRAL1Q9HBL8 299 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 NPHS2Q9NP85 383 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 MARK1Q9P0L2 795 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 MID2Q9UJV3 735 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms