RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 BAIAP2L1Q9UHR4 511 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 RIMKLBQ9ULI2 386 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 FCF1Q9Y324 198 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 ARIH1Q9Y4X5 557 aaPredicted RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 ASB3Q9Y575 518 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 DENND4CQ5VZ89 1909 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 A0A1W2PRU2 124 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 LCHNA4D1U4 455 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 ZBBXA8MT70 800 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 HIDE1A8MVS5 230 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 ANKRD66B4E2M5 251 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CCDC22O60826 627 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 H2AFYO75367 372 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 PRAMEF12O95522 483 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 ENO1P06733 434 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 CCDC166P0CW27 439 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 GM2AP17900 193 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CPA2P48052 419 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CDKN1CP49918 316 aaPredicted RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 SLC12A2P55011 1212 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 SLC7A9P82251 487 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 TSNAXIP1Q2TAA8 658 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 SLC9B1Q4ZJI4 515 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 INO80DQ53TQ3 878 aaPredicted RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 ATXN7L2Q5T6C5 722 aaPredicted RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 HTR3DQ70Z44 454 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 NECAB2Q7Z6G3 386 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 TDRD5Q8NAT2 981 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 HJURPQ8NCD3 748 aaPredicted RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 LPCAT1Q8NF37 534 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 OR4K2Q8NGD2 314 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 OR4L1Q8NH43 312 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 SLC22A17Q8WUG5 538 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 TSNARE1Q96NA8 513 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 RAB3IPQ96QF0 476 aaPredicted RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 TUBB6Q9BUF5 446 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 SLC46A2Q9BY10 475 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 STN1Q9H668 368 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 PLK2Q9NYY3 685 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CFAP97Q9P2B7 532 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 ZDHHC2Q9UIJ5 367 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 VPS28Q9UK41 221 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 ANKRD36A6QL64 1941 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 MATN2O00339 956 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 GSC2O15499 205 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 GRID2O43424 1007 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 SMAD6O43541 496 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 HNRNPCL1O60812 293 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 CSPG5O95196 566 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 PIGNO95427 931 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CRTAMO95727 393 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 ATP5BP06576 529 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 CKMP06732 381 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 C8AP07357 584 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 ESRRAP11474 423 aaPredicted RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 FDXRP22570 491 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CES1P23141 567 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 ABL2P42684 1182 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CREMQ03060 361 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 RCN2Q14257 317 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 TAF1AQ15573 450 aaPredicted RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 TYSND1Q2T9J0 566 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 SETMARQ53H47 684 aaPredicted RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 GPR158Q5T848 1215 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 TMC7Q7Z402 723 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 ISCA2Q86U28 154 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 FIBCD1Q8N539 461 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 KREMEN2Q8NCW0 462 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 RIN3Q8TB24 985 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 EID2BQ96D98 161 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 SHCBP1LQ9BZQ2 653 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CATSPERZQ9NTU4 200 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 HCFC1R1Q9NWW0 138 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 MID2Q9UJV3 735 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 APOBEC2Q9Y235 224 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 MED16Q9Y2X0 877 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 RAP2CQ9Y3L5 183 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CARNS1A5YM72 827 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 FZD6O60353 706 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 DIAPH2O60879 1101 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 JUNP05412 331 aaKnown RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 LTA4HP09960 611 aaKnown RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 TFEBP19484 476 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 AOC1P19801 751 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 STC1P52823 247 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 PFKPQ01813 784 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 CDH18Q13634 790 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 LAMB3Q13751 1172 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 FAM83EQ2M2I3 478 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 MRNIPQ6NTE8 343 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 GLT6D1Q7Z4J2 308 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 SPRED2Q7Z698 418 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 MRPS31Q92665 395 aaKnown RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 VOPP1Q96AW1 172 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 OR52B2Q96RD2 323 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 OSBPL1AQ9BXW6 950 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 ILKAPQ9H0C8 392 aaPredicted RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 CCL26Q9Y258 94 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 CCL16O15467 120 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 GYG2O15488 501 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms