RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 C1QTNF12Q5T7M4 302 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 CLYBLQ8N0X4 340 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 TXNDC5Q8NBS9 432 aaKnown RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 TRPV3Q8NET8 790 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 TBC1D15Q8TC07 691 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 SPPL2BQ8TCT7 592 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 ROPN1LQ96C74 230 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 HNRNPABQ99729 332 aaKnown RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 GIMAP2Q9UG22 337 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 TLL2Q9Y6L7 1015 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 C8BP07358 591 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 NOS2P35228 1153 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 MAP3K7CLP57077 242 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 TMEM132BQ14DG7 1078 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 TIGD2Q4W5G0 525 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 STRADAQ7RTN6 431 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 PAGE2Q7Z2X7 111 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 ANKFN1Q8N957 763 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 PNPT1Q8TCS8 783 aaKnown RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 WNT8BQ93098 351 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 PABPC5Q96DU9 382 aaKnown RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 CHID1Q9BWS9 393 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 PLAC1Q9HBJ0 212 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 SEMA4BQ9NPR2 832 aaPredicted RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 CCM2LQ9NUG4 571 aaPredicted RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 PNMA8BQ9ULN7 279 aaPredicted RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 FZD1Q9UP38 647 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 TAF4O00268 1085 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 SNPHO15079 494 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 C1QAP02745 245 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 ARSAP15289 507 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 MYF6P23409 242 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 MAGEA3P43357 314 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 GSTM4Q03013 218 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 PSMD5Q16401 504 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 ZNF280DQ6N043 979 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 RALGPS2Q86X27 583 aaPredicted RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 CCDC117Q8IWD4 279 aaPredicted RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 TP53INP2Q8IXH6 220 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 SYTL1Q8IYJ3 562 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 C2orf69Q8N8R5 385 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 KDM1BQ8NB78 822 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 RPL10LQ96L21 214 aaKnown RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 ZNF560Q96MR9 790 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 MUS81Q96NY9 551 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 SLC38A7Q9NVC3 462 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 RBM22Q9NW64 420 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 COMMD8Q9NX08 183 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 SNTG2Q9NY99 539 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 KIF17Q9P2E2 1029 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 ANGPTL3Q9Y5C1 460 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 BBIP1A8MTZ0 92 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 H3BMM5 538 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 B4GAT1O43505 415 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 MT-CYBP00156 380 aaPredicted RBP13.06□□□□□ -0.32
TRIM35-201ENST00000305364 THRBP10828 461 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 SLC25A52Q3SY17 297 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 NANOGP8Q6NSW7 305 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 LYSMD3Q7Z3D4 306 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 BNIPLQ7Z465 357 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 TMEM110Q86TL2 294 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 AKAP14Q86UN6 197 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 VPS33AQ96AX1 596 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 ERGIC3Q9Y282 383 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 LINC00854A0A1B0GVQ3 168 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 KRBA1A5PL33 1030 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 MGEA5O60502 916 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 RGS20O76081 388 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 BMP2P12643 396 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 IL7RP16871 459 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 ALOX12P18054 663 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 CHRM3P20309 590 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 GLUD2P49448 558 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 PKN3Q6P5Z2 889 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 DNAJC14Q6Y2X3 702 aaPredicted RBP13.06□□□□□ -0.32
TRIM35-201ENST00000305364 ZFYVE19Q96K21 471 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 DPEP3Q9H4B8 488 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 PABPN1LA6NDY0 278 aaKnown RBP13.06□□□□□ -0.32
TRIM35-201ENST00000305364 ZNF701M0R085 212 aaPredicted RBP13.06□□□□□ -0.32
TRIM35-201ENST00000305364 PSMD11O00231 422 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 WNT10BO00744 389 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 CES1P23141 567 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 DEFA1P59665 94 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 DEFA3P59666 94 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 FBXO48Q5FWF7 155 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 ANKRD26P1Q6NSI1 321 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 ATG14Q6ZNE5 492 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 IGFN1Q86VF2 1251 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 VAT1Q99536 393 aa13.06□□□□□ -0.32
TRIM35-201ENST00000305364 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.06□□□□□ -0.32
TRIM35-201ENST00000305364 AZIN1O14977 448 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 RAD51BO15315 384 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 FARP2O94887 1054 aaPredicted RBP13.05□□□□□ -0.32
TRIM35-201ENST00000305364 STBD1O95210 358 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 SLC35E2BP0CK96 405 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 CD247P20963 164 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 POU4F1Q01851 419 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 CMTR2Q8IYT2 770 aaKnown RBP13.05□□□□□ -0.32
TRIM35-201ENST00000305364 FNDC5Q8NAU1 212 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms