RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 TREML1Q86YW5 311 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 SLITRK4Q8IW52 837 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 CHERPQ8IWX8 916 aaKnown RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 C4orf33Q8N1A6 199 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 AGBL3Q8NEM8 1001 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 TOR1AIP2Q8NFQ8 470 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 OXER1Q8TDS5 423 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 TMEM68Q96MH6 324 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PPP1R10Q96QC0 940 aaKnown RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 TWNKQ96RR1 684 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ADGRE3Q9BY15 652 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 MAGIXQ9H6Y5 334 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PDGFCQ9NRA1 345 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ZDHHC18Q9NUE0 388 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 KLHL11Q9NVR0 708 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 KLHL42Q9P2K6 505 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 JAG2Q9Y219 1238 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PRELID1Q9Y255 219 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 A0A088AWK7 358 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 RAB19A4D1S5 217 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 AP5Z1O43299 807 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF10P21506 573 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 DCKP27707 260 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 POU1F1P28069 291 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ALDH3A2P51648 485 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 BDH1Q02338 343 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PEX6Q13608 980 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 CASP12Q6UXS9 341 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ADGRF4Q8IZF3 695 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 KCNV2Q8TDN2 545 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 AP2M1Q96CW1 435 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 BBS4Q96RK4 519 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 SEPT5Q99719 369 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 SLC22A4Q9H015 551 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 CDH22Q9UJ99 828 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 TCRBV5S4A2TA0A5A2 114 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 USP17L3A6NCW0 530 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 USP17L4A6NCW7 530 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 VSTM5A8MXK1 200 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF879B4DU55 563 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 DFFAO00273 331 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 GNAZP19086 355 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 CRKLP46109 303 aaKnown RBP5.25□□□□□ -1.57
SCN1A-201ENST00000303395 DNAJB13P59910 316 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 RGS1Q08116 209 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 ILF3Q12906 894 aaKnown RBP eCLIP5.25□□□□□ -1.57
SCN1A-201ENST00000303395 PDIA6Q15084 440 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 USP17L1Q7RTZ2 530 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 KIF2BQ8N4N8 673 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 TSEN2Q8NCE0 465 aaKnown RBP5.25□□□□□ -1.57
SCN1A-201ENST00000303395 SMG8Q8ND04 991 aaKnown RBP5.25□□□□□ -1.57
SCN1A-201ENST00000303395 SRFBP1Q8NEF9 429 aaKnown RBP5.25□□□□□ -1.57
SCN1A-201ENST00000303395 ITFG1Q8TB96 612 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 SDR42E1Q8WUS8 393 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 AKAP1Q92667 903 aaKnown RBP eCLIP5.25□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF594Q96JF6 807 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-201ENST00000303395 TEKT5Q96M29 485 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 PHB2Q99623 299 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 GPATCH1Q9BRR8 931 aaKnown RBP5.25□□□□□ -1.57
SCN1A-201ENST00000303395 KLHL1Q9NR64 748 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 CDH7Q9ULB5 785 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 MINPP1Q9UNW1 487 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 LAMB4A4D0S4 1761 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 RICTORQ6R327 1708 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 ANKDD1BA6NHY2 528 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 RHPN2P1A8MT19 583 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 USP17L5A8MUK1 530 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 E7ESA3 106 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 SLC28A1O00337 649 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 GABRDO14764 452 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 MYL12BO14950 172 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 SERPINA3P01011 423 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 GSTT2BP0CG30 244 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 CCNFP41002 786 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 RHDQ02161 417 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 GLRA4Q5JXX5 417 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 TATDN1Q6P1N9 297 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 IRF2BP2Q7Z5L9 587 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 P2RY8Q86VZ1 359 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 KCTD10Q9H3F6 313 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 CXorf21Q9HAI6 301 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 CLN6Q9NWW5 311 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 ASB3Q9Y575 518 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 DLG5Q8TDM6 1919 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 AIM2O14862 343 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 PIGRP01833 764 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 SNHG28P0DPA3 235 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 IL1R1P14778 569 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 CHMP24386 653 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 S100A2P29034 98 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 SLC6A4P31645 630 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 VBP1P61758 197 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 EMC2Q15006 297 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 ATP13A5Q4VNC0 1218 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 SLC38A2Q96QD8 506 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 SPON2Q9BUD6 331 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 CHID1Q9BWS9 393 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 C1QTNF7Q9BXJ2 289 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 SLC29A3Q9BZD2 475 aa5.25□□□□□ -1.57
SCN1A-201ENST00000303395 INTS7Q9NVH2 962 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms