RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 TRIM55Q9BYV6 548 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 COPG2Q9UBF2 871 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 CCL26Q9Y258 94 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 ACOT9Q9Y305 439 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 CCDC195A0A1B0GUA6 201 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 CCDC162PA2VCL2 907 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 EPOPA6NHQ4 379 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 CD3EAPO15446 510 aaKnown RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 HTRA2O43464 458 aaPredicted RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 DCTN3O75935 186 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 HAUS5O94927 633 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 IGSF6O95976 241 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 S1PR4O95977 384 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 SERPINE1P05121 402 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 SLC35E2BP0CK96 405 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 FGF3P11487 239 aaPredicted RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 CPA3P15088 417 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 LPOP22079 712 aaPredicted RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 CD70P32970 193 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 SLC26A3P40879 764 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 SLC12A2P55011 1212 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 OCRLQ01968 901 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 BST1Q10588 318 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 STX3Q13277 289 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 PCLAFQ15004 111 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 CHI3L2Q15782 390 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 TYSND1Q2T9J0 566 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 PITRM1Q5JRX3 1037 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 RNF187Q5TA31 235 aaPredicted RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 C16orf46Q6P387 395 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 AFTPHQ6ULP2 937 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 TPGS1Q6ZTW0 290 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 RAPH1Q70E73 1250 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 GLT6D1Q7Z4J2 308 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 SPRED2Q7Z698 418 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 GRASPQ7Z6J2 395 aaPredicted RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 KIAA0907Q7Z7F0 614 aaPredicted RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 SDCCAG8Q86SQ7 713 aaPredicted RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 SLC41A1Q8IVJ1 513 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 TTC30BQ8N4P2 665 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.03□□□□□ -0.48
TPM3-202ENST00000302206 ACVR1CQ8NER5 493 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 LPCAT1Q8NF37 534 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 OR6Y1Q8NGX8 325 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 OR4L1Q8NH43 312 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 C10orf82Q8WW14 230 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 CDKN2AIPNLQ96HQ2 116 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 DNAJC1Q96KC8 554 aaKnown RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 EXOC2Q96KP1 924 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 TBATAQ96M53 351 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 SIKE1Q9BRV8 207 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 MFRPQ9BY79 579 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 CEP44Q9C0F1 390 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 SMG9Q9H0W8 520 aaKnown RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 CAB39LQ9H9S4 337 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 NMRAL1Q9HBL8 299 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 POPDC3Q9HBV1 291 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 MAGEE1Q9HCI5 957 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 SPHK2Q9NRA0 654 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 CATSPERZQ9NTU4 200 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 INTS10Q9NVR2 710 aaKnown RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 THAP1Q9NVV9 213 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 INTS6Q9UL03 887 aaKnown RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 HS3ST2Q9Y278 367 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 FCF1Q9Y324 198 aaKnown RBP12.03□□□□□ -0.48
TPM3-202ENST00000302206 KCTD3Q9Y597 815 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 PCDHGC4Q9Y5F7 938 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 SPO11Q9Y5K1 396 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 HCFC2Q9Y5Z7 792 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 ARL5AQ9Y689 179 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 NOTCH4Q99466 2003 aa12.03□□□□□ -0.48
TPM3-202ENST00000302206 H7C0S8 307 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 KLHL2O95198 593 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 PGLSO95336 258 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 TOP3BO95985 862 aaKnown RBP12.02□□□□□ -0.49
TPM3-202ENST00000302206 MT-CO1P00395 513 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 GOT2P00505 430 aaKnown RBP12.02□□□□□ -0.49
TPM3-202ENST00000302206 ATP5BP06576 529 aaKnown RBP12.02□□□□□ -0.49
TPM3-202ENST00000302206 PDHA1P08559 390 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 ABCG1P45844 678 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 TAS2R39P59534 338 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 DLG2Q15700 870 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 DUSP6Q16828 381 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 GALNTL6Q49A17 601 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 ARMC12Q5T9G4 340 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 FAM45BPQ6NSW5 357 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 CNSTQ6PJW8 725 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 PTAR1Q7Z6K3 402 aaPredicted RBP12.02□□□□□ -0.49
TPM3-202ENST00000302206 TMEM25Q86YD3 366 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 CRLF3Q8IUI8 442 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 MFSD6LQ8IWD5 586 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 PLPP6Q8IY26 295 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 PLD6Q8N2A8 252 aaKnown RBP12.02□□□□□ -0.49
TPM3-202ENST00000302206 CELF5Q8N6W0 485 aaKnown RBP12.02□□□□□ -0.49
TPM3-202ENST00000302206 MDGA1Q8NFP4 955 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 PPP1R14CQ8TAE6 165 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 RIN3Q8TB24 985 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 FAM45AQ8TCE6 357 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 MYO19Q96H55 970 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms