RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 GIMAP2Q9UG22 337 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 A8MT66 165 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 TOR1BO14657 336 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 INPP4BO15327 924 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 HSD17B1P14061 328 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 STMN1P16949 149 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 NFKB1P19838 968 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 GSSP48637 474 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 TAS2R39P59534 338 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 DNAJB13P59910 316 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 MBTD1Q05BQ5 628 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 MXD4Q14582 209 aaPredicted RBP10.92□□□□□ -0.66
ZNF558-201ENST00000301475 TMEM132BQ14DG7 1078 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 PSMD5Q16401 504 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 CYP51A1Q16850 503 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 INAVAQ3KP66 663 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 ZIK1Q3SY52 487 aaPredicted RBP10.92□□□□□ -0.66
ZNF558-201ENST00000301475 VPS26BQ4G0F5 336 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 AGAP7PQ5VUJ5 663 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 LARP4Q71RC2 724 aaKnown RBP eCLIP10.92□□□□□ -0.66
ZNF558-201ENST00000301475 TRIM15Q9C019 465 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 DPEP3Q9H4B8 488 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 MYOZ2Q9NPC6 264 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 RCOR3Q9P2K3 495 aaPredicted RBP10.92□□□□□ -0.66
ZNF558-201ENST00000301475 KIAA1257Q9ULG3 409 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 NOX1Q9Y5S8 564 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 CITO14578 2027 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 A0A0G2JMZ2 1700 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 LRRC37A2A6NM11 1700 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 A0A0J9YYE9 177 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 UBFD1O14562 309 aaKnown RBP10.91□□□□□ -0.66
ZNF558-201ENST00000301475 PFDN6O15212 129 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 BCAS1O75363 584 aaPredicted RBP10.91□□□□□ -0.66
ZNF558-201ENST00000301475 NCK1P16333 377 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 IL7RP16871 459 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 TGM1P22735 817 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 SLC6A2P23975 617 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 SELENBP1Q13228 472 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 ZNF846Q147U1 533 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 PAFAH1B3Q15102 231 aaKnown RBP10.91□□□□□ -0.66
ZNF558-201ENST00000301475 SF3B4Q15427 424 aaKnown RBP eCLIP10.91□□□□□ -0.66
ZNF558-201ENST00000301475 PGS1Q32NB8 556 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 BROXQ5VW32 411 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 ITIH5Q86UX2 942 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 SFRP1Q8N474 314 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.91□□□□□ -0.66
ZNF558-201ENST00000301475 MRPL57Q9BQC6 102 aaKnown RBP10.91□□□□□ -0.66
ZNF558-201ENST00000301475 YTHDF1Q9BYJ9 559 aaKnown RBP10.91□□□□□ -0.66
ZNF558-201ENST00000301475 C2orf40Q9H1Z8 148 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 TNFSF13BQ9Y275 285 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 PTGDR2Q9Y5Y4 395 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 TCRBV5S2A0A599 114 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 PPEF2O14830 753 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 ABCB7O75027 752 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 XYLBO75191 536 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 RSL1D1O76021 490 aaKnown RBP10.91□□□□□ -0.66
ZNF558-201ENST00000301475 HTR1AP08908 422 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 ARNTP27540 789 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 EEF1DP29692 281 aaKnown RBP10.91□□□□□ -0.66
ZNF558-201ENST00000301475 ICAM3P32942 547 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 MICALL2Q8IY33 904 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 PARP8Q8N3A8 854 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 SMG8Q8ND04 991 aaKnown RBP10.91□□□□□ -0.66
ZNF558-201ENST00000301475 ZFP90Q8TF47 636 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 CGREF1Q99674 301 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 SLC30A3Q99726 388 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 CTRCQ99895 268 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 FUNDC2Q9BWH2 189 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 SNX25Q9H3E2 840 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 ATP13A3Q9H7F0 1226 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 IGSF5Q9NSI5 407 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 MRGBPQ9NV56 204 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 V9GYQ6 96 aa10.91□□□□□ -0.66
ZNF558-201ENST00000301475 PHIPQ8WWQ0 1821 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 FAM72CH0Y354 149 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 AURKAO14965 403 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 DCLK1O15075 740 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 MSI1O43347 362 aaKnown RBP10.9□□□□□ -0.66
ZNF558-201ENST00000301475 NDUFB5O43674 189 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 HTR1BP28222 390 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 SULT1E1P49888 294 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 GMPSP49915 693 aaPredicted RBP10.9□□□□□ -0.66
ZNF558-201ENST00000301475 APLP1P51693 650 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 CLCN3P51790 818 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 POU5F1BQ06416 359 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 BNIP2Q12982 314 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 CSHL1Q14406 222 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 TMEM132DQ14C87 1099 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 STXBP2Q15833 593 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 TECRLQ5HYJ1 363 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 FAM72AQ5TYM5 149 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 FAM72DQ6L9T8 149 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 STRADAQ7RTN6 431 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 FAM83AQ86UY5 434 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 FAM72BQ86X60 149 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 ZDHHC17Q8IUH5 632 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 NPWQ8N729 165 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 DNERQ8NFT8 737 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 PTCD2Q8WV60 388 aaKnown RBP10.9□□□□□ -0.66
ZNF558-201ENST00000301475 PHF21BQ96EK2 531 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms