RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 BTBD8Q5XKL5 378 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 TBPL2Q6SJ96 375 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 C19orf60Q96EN9 201 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 KCTD14Q9BQ13 255 aaPredicted RBP14.71□□□□□ -0.06
COL6A2-201ENST00000300527 CMTM6Q9NX76 183 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 FBXO5Q9UKT4 447 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 ERGIC3Q9Y282 383 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 IGKV6D-21A0A0A0MT36 114 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 SOWAHBA6NEL2 793 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 BEST1O76090 585 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 TKTP29401 623 aaKnown RBP14.7□□□□□ -0.06
COL6A2-201ENST00000300527 IDUAP35475 653 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 PRKAA2P54646 552 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 MAP3K7CLP57077 242 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 ZNF354CQ86Y25 554 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 DCBLD1Q8N8Z6 715 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 GPR20Q99678 358 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 GBA3Q9H227 469 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 AS3MTQ9HBK9 375 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 TUBA8Q9NY65 449 aaPredicted RBP14.7□□□□□ -0.06
COL6A2-201ENST00000300527 STAP1Q9ULZ2 295 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 CRYL1Q9Y2S2 319 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 KPNA4O00629 521 aaPredicted RBP14.7□□□□□ -0.06
COL6A2-201ENST00000300527 DYNC1LI2O43237 492 aaPredicted RBP14.7□□□□□ -0.06
COL6A2-201ENST00000300527 NPHS1O60500 1241 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 CLPXO76031 633 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 CAPNS1P04632 268 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 YBX3P16989 372 aaKnown RBP eCLIP14.7□□□□□ -0.06
COL6A2-201ENST00000300527 IST1P53990 364 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 FPGSQ05932 587 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 DMPKQ09013 629 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 PPIL2Q13356 520 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 PKDCCQ504Y2 493 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 TMTC4Q5T4D3 741 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 CRTC3Q6UUV7 619 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 PIM3Q86V86 326 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 PPHLN1Q8NEY8 458 aaKnown RBP14.7□□□□□ -0.06
COL6A2-201ENST00000300527 CHPT1Q8WUD6 406 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 AGPAT4Q9NRZ5 378 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 GNPTGQ9UJJ9 305 aa14.7□□□□□ -0.06
COL6A2-201ENST00000300527 SNAP91O60641 907 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 APBA3O96018 575 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 HGFP14210 728 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 GPR158Q5T848 1215 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 STRADAQ7RTN6 431 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 SAPCD2Q86UD0 394 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 CENPIQ92674 756 aaPredicted RBP14.69□□□□□ -0.06
COL6A2-201ENST00000300527 TOP1MTQ969P6 601 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 GPR78Q96P69 363 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 OLFM1Q99784 485 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 GIN1Q9NXP7 522 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 MAP10Q9P2G4 905 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 TSR3Q9UJK0 312 aaKnown RBP14.69□□□□□ -0.06
COL6A2-201ENST00000300527 UBFD1O14562 309 aaKnown RBP14.69□□□□□ -0.06
COL6A2-201ENST00000300527 SHMT2P34897 504 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 NOS2P35228 1153 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 HK2P52789 917 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 SPCS2Q15005 226 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 CCDC81Q6ZN84 652 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 ADGRG5Q8IZF4 528 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 SFRP1Q8N474 314 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 ZNF420Q8TAQ5 688 aaPredicted RBP14.69□□□□□ -0.06
COL6A2-201ENST00000300527 TEPSINQ96N21 525 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 SEZ6LQ9BYH1 1024 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 CACNG4Q9UBN1 327 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 ANAPC2Q9UJX6 822 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 PTBP2Q9UKA9 531 aaKnown RBP14.69□□□□□ -0.06
COL6A2-201ENST00000300527 CDH7Q9ULB5 785 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 TCAF1Q9Y4C2 921 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 FAM155AB1AL88 458 aaPredicted RBP14.69□□□□□ -0.06
COL6A2-201ENST00000300527 TARM1B6A8C7 271 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 PIP5K1BO14986 540 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 TTKP33981 857 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 KPNA2P52292 529 aaKnown RBP14.69□□□□□ -0.06
COL6A2-201ENST00000300527 TPTEP56180 551 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 CBLBQ13191 982 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 TNFAIP1Q13829 316 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 PLA2G4EQ3MJ16 856 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 CYBRD1Q53TN4 286 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 PAGE2BQ5JRK9 111 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 CCNYL2Q5T2Q4 361 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 AGAP9Q5VTM2 703 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 PKN3Q6P5Z2 889 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 SLC2A7Q6PXP3 512 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 Q8N9G6 341 aaPredicted RBP14.69□□□□□ -0.06
COL6A2-201ENST00000300527 ANKRD49Q8WVL7 239 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 SDCCAG3Q96C92 435 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 PDGFCQ9NRA1 345 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 TIMM22Q9Y584 194 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 RAD54BQ9Y620 910 aa14.69□□□□□ -0.06
COL6A2-201ENST00000300527 MAGEB16A2A368 324 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 NCF1BA6NI72 391 aaPredicted RBP14.68□□□□□ -0.06
COL6A2-201ENST00000300527 NCF1CA8MVU1 366 aaPredicted RBP14.68□□□□□ -0.06
COL6A2-201ENST00000300527 NOBOXO60393 691 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 NCF1P14598 390 aaPredicted RBP14.68□□□□□ -0.06
COL6A2-201ENST00000300527 ICAM3P32942 547 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 ADRA1BP35368 520 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 TKTL1P51854 596 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 LIPEQ05469 1076 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 DGCR6Q14129 220 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms