RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 HEMK1Q9Y5R4 338 aaPredicted RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 ITGB4P16144 1822 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 NRCAMQ92823 1304 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 RTN3O95197 1032 aaPredicted RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 HIST1H2AGP0C0S8 130 aaPredicted RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 HIST1H2ADP20671 130 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 AQP1P29972 269 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 PBLDP30039 288 aaPredicted RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 SLC5A3P53794 718 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 RPL38P63173 70 aaKnown RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 CDH18Q13634 790 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 TRIM25Q14258 630 aaKnown RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 FAM43BQ6ZT52 329 aaPredicted RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 LRRC8DQ7L1W4 858 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 DET1Q7L5Y6 550 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 ZC3HC1Q86WB0 502 aaKnown RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 PDSS2Q86YH6 399 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 GPSM1Q86YR5 675 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 FAM120BQ96EK7 910 aaKnown RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 HIST1H2AHQ96KK5 128 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 TMEM74Q96NL1 305 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 HIST1H2AJQ99878 128 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 H2AFJQ9BTM1 129 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 PARVBQ9HBI1 364 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 CATSPERZQ9NTU4 200 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 DAPK2Q9UIK4 370 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 A0A1B0GUL6 1792 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 J3QRK9 145 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 RHOCP08134 193 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 OCM2P0CE71 109 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 OCMP0CE72 109 aaPredicted RBP13.33□□□□□ -0.27
CASC4-201ENST00000299957 CCNG1P51959 295 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 MS4A2Q01362 244 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 SLC10A7Q0GE19 358 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 GRIK3Q13003 919 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 TSNQ15631 228 aaKnown RBP13.33□□□□□ -0.27
CASC4-201ENST00000299957 INSCQ1MX18 579 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 GPRIN1Q7Z2K8 1008 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 C11orf96Q7Z7L8 435 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 ANKRD23Q86SG2 305 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 ANKRD46Q86W74 232 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 HORMAD1Q86X24 394 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 ZDHHC13Q8IUH4 622 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 PNPT1Q8TCS8 783 aaKnown RBP13.33□□□□□ -0.27
CASC4-201ENST00000299957 SLC16A10Q8TF71 515 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 FBXL8Q96CD0 374 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 DPY30Q9C005 99 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 MTF2Q9Y483 593 aaPredicted RBP13.33□□□□□ -0.27
CASC4-201ENST00000299957 ARL5AQ9Y689 179 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 UBR2Q8IWV8 1755 aa13.33□□□□□ -0.27
CASC4-201ENST00000299957 A0A0U1RQS6 177 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 NPEPPSL1A6NEC2 478 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 C16orf96A6NNT2 1141 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 J3KR12 359 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
CASC4-201ENST00000299957 ATN1P54259 1190 aaPredicted RBP13.33□□□□□ -0.28
CASC4-201ENST00000299957 HSPA14Q0VDF9 509 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 SQLEQ14534 574 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 OGFOD2Q6N063 350 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 ZNF276Q8N554 614 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 NPWQ8N729 165 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 PPTC7Q8NI37 304 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 UTP15Q8TED0 518 aaKnown RBP13.33□□□□□ -0.28
CASC4-201ENST00000299957 DLG3Q92796 817 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 ZFYVE28Q9HCC9 887 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 SYTL2Q9HCH5 934 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 DLGAP3O95886 979 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 CNPP09543 421 aaKnown RBP13.33□□□□□ -0.28
CASC4-201ENST00000299957 ZNF37AP17032 561 aaPredicted RBP13.33□□□□□ -0.28
CASC4-201ENST00000299957 MTPNP58546 118 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 RHOAP61586 193 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 CYP4F2P78329 520 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 CYP4F3Q08477 520 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 SIM2Q14190 667 aaPredicted RBP13.33□□□□□ -0.28
CASC4-201ENST00000299957 RABL3Q5HYI8 236 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 TXNDC5Q8NBS9 432 aaKnown RBP13.33□□□□□ -0.28
CASC4-201ENST00000299957 OR7D4Q8NG98 312 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 TRIM62Q9BVG3 475 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 GMPR2Q9P2T1 348 aaKnown RBP13.33□□□□□ -0.28
CASC4-201ENST00000299957 PCDHB9Q9Y5E1 797 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 NAV1Q8NEY1 1877 aa13.33□□□□□ -0.28
CASC4-201ENST00000299957 A6NHS1 94 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 ENPP3O14638 875 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 EI24O14681 340 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 CD3EAPO15446 510 aaKnown RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 RNASEH2AO75792 299 aaKnown RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 CDH5P33151 784 aaPredicted RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 RECQLP46063 649 aaPredicted RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 EIF2B2P49770 351 aaKnown RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 TRIM60Q495X7 471 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 TIGD5Q53EQ6 642 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 CEP97Q8IW35 865 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 CLYBLQ8N0X4 340 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 TWIST2Q8WVJ9 160 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 TCF12Q99081 682 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 BDH2Q9BUT1 245 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 PRKD2Q9BZL6 878 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 SPASTQ9UBP0 616 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 OAZ3Q9UMX2 235 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms