RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 COPS4Q9BT78 406 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 ZNHIT2Q9UHR6 403 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SNX6Q9UNH7 406 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 RBM7Q9Y580 266 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SULT1B1O43704 296 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 RBL1P28749 1068 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 EPHA3P29320 983 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 TRIM23P36406 574 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 CYP4F8P98187 520 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SAMD7Q7Z3H4 446 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 STAG3L4Q8TBR4 150 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 CSGALNACT1Q8TDX6 532 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 RERGQ96A58 199 aaPredicted RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 GMCL1Q96IK5 515 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 DEFB129Q9H1M3 183 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 BRD9Q9H8M2 597 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 RASSF1Q9NS23 344 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF214Q9UL59 606 aaPredicted RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 FAM205AQ6ZU69 1335 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ABHD14A-ACY1A0A1B0GW23 586 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SH3D21A4FU49 640 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 TRIM38O00635 465 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SLC22A2O15244 555 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 FGF10O15520 208 aaPredicted RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 CALCAP01258 141 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 NTRK1P04629 796 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 KDELR1P24390 212 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 UGT1A5P35504 534 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SCN1BQ07699 218 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 GRB14Q14449 540 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 HKDC1Q2TB90 917 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SLC39A12Q504Y0 691 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ALKBH2Q6NS38 261 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 KCNT2Q6UVM3 1135 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 RAB2BQ8WUD1 216 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 AIF1LQ9BQI0 150 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 FDXACB1Q9BRP7 624 aaPredicted RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 GON4LQ3T8J9 2241 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 TLX1P31314 330 aaPredicted RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 GMPSP49915 693 aaPredicted RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 TBX2Q13207 712 aaPredicted RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 POM121L1PQ3SYA9 428 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 FBXL19Q6PCT2 694 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SLCO6A1Q86UG4 719 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 DNAJB3Q8WWF6 145 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ATL1Q8WXF7 558 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ITCHQ96J02 903 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 IL22Q9GZX6 179 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 CKLFQ9UBR5 152 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SAMHD1Q9Y3Z3 626 aaKnown RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 OPLAHO14841 1288 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 LTA4HP09960 611 aaKnown RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 BTN3A2P78410 334 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ST3GAL1Q11201 340 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 STXBP5Q5T5C0 1151 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 CXorf57Q6NSI4 855 aaKnown RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SLC9A6Q92581 669 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 DNAJC18Q9H819 358 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SPEF1Q9Y4P9 236 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ADAMTSL3P82987 1691 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 LACTBL1A8MY62 500 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 PSMD9O00233 223 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 CNSTQ6PJW8 725 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 KIAA0895Q8NCT3 520 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 OR2L5Q8NG80 312 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 FBXO9Q9UK97 447 aaPredicted RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 TMEM150BA6NC51 233 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 E5RJQ4 531 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SLC28A1O00337 649 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ENTPD5O75356 428 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ALDH2P05091 517 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SDC2P34741 201 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ZBTB46Q86UZ6 589 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 KATNAL2Q8IYT4 538 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 PTCD3Q96EY7 689 aaKnown RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SLC39A8Q9C0K1 460 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SMPD4Q9NXE4 827 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 GPSM3Q9Y4H4 160 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 PPRC1Q5VV67 1664 aaKnown RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 CASKO14936 926 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SIN3BO75182 1162 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 PGK1P00558 417 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 SNRPB2P08579 225 aaKnown RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 BACE1P56817 501 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 STXBP1P61764 594 aaKnown RBP5.57□□□□□ -1.52
CPSF2-201ENST00000298875 KCNJ2P63252 427 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 RNF43Q68DV7 783 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF613Q6PF04 617 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 OAFQ86UD1 273 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 CYP4X1Q8N118 509 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 FCGR1BQ92637 280 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 PPP1R16AQ96I34 528 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 C12orf4Q9NQ89 552 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 KIF13AQ9H1H9 1805 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 TRIM64CA6NLI5 447 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 CTSEP14091 401 aa5.57□□□□□ -1.52
CPSF2-201ENST00000298875 HGFP14210 728 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms