RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 SCNN1AP37088 669 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 PCYT1AP49585 367 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 OCA2Q04671 838 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 SLC16A12Q6ZSM3 486 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 FAM131BQ86XD5 332 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 CNTN4Q8IWV2 1026 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 LEMD2Q8NC56 503 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 CPB2Q96IY4 423 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 KLHL25Q9H0H3 589 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 TRPC5Q9UL62 973 aaPredicted RBP13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 TNFSF13BQ9Y275 285 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 COL11A1P12107 1806 aaPredicted RBP13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 FAM95CA0A1B0GW59 222 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 MSI1O43347 362 aaKnown RBP13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 RAD17O75943 681 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 STAU1O95793 577 aaKnown RBP13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 ALDOCP09972 364 aaKnown RBP13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 CD68P34810 354 aaPredicted RBP13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 SHMT2P34897 504 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 STAT5BP51692 787 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 RAD23AP54725 363 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 GALNT1Q10472 559 aaPredicted RBP13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 NDUFA5Q16718 116 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 UGP2Q16851 508 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 EML3Q32P44 896 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 FAM83AQ86UY5 434 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 LRRC71Q8N4P6 559 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 HEXDCQ8WVB3 486 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 OTUD5Q96G74 571 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 VMP1Q96GC9 406 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 MUS81Q96NY9 551 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 KIFC1Q9BW19 673 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 NDUFAF1Q9Y375 327 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 A0A0J9YYE9 177 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 STAG3L1P0CL83 205 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 SLC6A2P23975 617 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 KPNA2P52292 529 aaKnown RBP13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 STX1BP61266 288 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 TRIM32Q13049 653 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 SELENBP1Q13228 472 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 CYP51A1Q16850 503 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 SPATS1Q496A3 300 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 BPHLQ86WA6 291 aaPredicted RBP13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 BTN2A3PQ96KV6 586 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 APOL2Q9BQE5 337 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 FUNDC2Q9BWH2 189 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 IL1RL2Q9HB29 575 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 FBRSL1Q9HCM7 1045 aaKnown RBP13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 DGKBQ9Y6T7 804 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 LCTP09848 1927 aa13.54□□□□□ -0.24
RPUSD4-201ENST00000298317 ZNF638Q14966 1978 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 IGKV6-21A0A0C4DH24 114 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 INO80B-WBP1J3KQ70 363 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 TNFRSF10AO00220 468 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 NR5A2O00482 541 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 DCLK1O15075 740 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 ZBTB24O43167 697 aaPredicted RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 GAS2O43903 313 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 ALBP02768 609 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 TPH1P17752 444 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 KCNA5P22460 613 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 CRHBPP24387 322 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 YBX1P67809 324 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 INAVAQ3KP66 663 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 VASH1Q7L8A9 365 aaPredicted RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 PIWIL3Q7Z3Z3 882 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 ACOT1Q86TX2 421 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 FAM35AQ86V20 835 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 C11orf74Q86VG3 221 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 TBC1D21Q8IYX1 336 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 SPARTQ8N0X7 666 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 S100ZQ8WXG8 99 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 CENPOQ9BU64 300 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 MUC13Q9H3R2 512 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 EHD1Q9H4M9 534 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 ASB7Q9H672 318 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 ATP13A3Q9H7F0 1226 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 RMND5AQ9H871 391 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 VTA1Q9NP79 307 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 VPS51Q9UID3 782 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 ENPP5Q9UJA9 477 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 A0A087X1B8 175 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 A8MT66 165 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 IPO13O94829 963 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 MYO1DO94832 1006 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 FARP2O94887 1054 aaPredicted RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 CYP2C8P10632 490 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 NCAM1P13591 858 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 CAPN3P20807 821 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 UBA1P22314 1058 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 RCVRNP35243 200 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 SKIV2LQ15477 1246 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 TECRLQ5HYJ1 363 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 RBM48Q5RL73 367 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 IQSEC1Q6DN90 963 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms