RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NOMO2Q5JPE7 1267 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 THOC7Q6I9Y2 204 aaKnown RBP15.65■□□□□ 0.1
UBAP1-201ENST00000297661 ZBTB49Q6ZSB9 765 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 TMEM26Q6ZUK4 368 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 RPS27LQ71UM5 84 aaKnown RBP15.65■□□□□ 0.1
UBAP1-201ENST00000297661 TAC4Q86UU9 113 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 MFSD6LQ8IWD5 586 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 ZNF420Q8TAQ5 688 aaPredicted RBP15.65■□□□□ 0.1
UBAP1-201ENST00000297661 NAA50Q9GZZ1 169 aaKnown RBP15.65■□□□□ 0.1
UBAP1-201ENST00000297661 ILKAPQ9H0C8 392 aaPredicted RBP15.65■□□□□ 0.1
UBAP1-201ENST00000297661 CCDC68Q9H2F9 335 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 PRDM16Q9HAZ2 1276 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 NCKIPSDQ9NZQ3 722 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 IPO11Q9UI26 975 aaKnown RBP15.65■□□□□ 0.1
UBAP1-201ENST00000297661 ADAM28Q9UKQ2 775 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 C9IYK1 514 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 GABRDO14764 452 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 ARHGEF6Q15052 776 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 XKR4Q5GH76 650 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 MFSD14CQ5VZR4 134 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 IQSEC1Q6DN90 963 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 ANKRD26P1Q6NSI1 321 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 ZC3HC1Q86WB0 502 aaKnown RBP15.65■□□□□ 0.1
UBAP1-201ENST00000297661 HERC6Q8IVU3 1022 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 CEP97Q8IW35 865 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 TMEM151AQ8N4L1 468 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 SLC15A4Q8N697 577 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 TFAP2CQ92754 450 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 ASB9Q96DX5 294 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 DOK1Q99704 481 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 PALMDQ9NP74 551 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 GIN1Q9NXP7 522 aa15.65■□□□□ 0.1
UBAP1-201ENST00000297661 NEMP2A6NFY4 417 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 CFAP99D6REC4 459 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 SEC24DO94855 1032 aaPredicted RBP15.64■□□□□ 0.09
UBAP1-201ENST00000297661 MPOP05164 745 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 ZNF865P0CJ78 1059 aaPredicted RBP15.64■□□□□ 0.09
UBAP1-201ENST00000297661 SLC35E2BP0CK96 405 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 DCKP27707 260 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 PSEN2P49810 448 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 RPS3AP61247 264 aaKnown RBP15.64■□□□□ 0.09
UBAP1-201ENST00000297661 RHDQ02161 417 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 GALNT2Q10471 571 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 ESRP1Q6NXG1 681 aaKnown RBP15.64■□□□□ 0.09
UBAP1-201ENST00000297661 SLC7A5P1Q8MH63 180 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 FSTL5Q8N475 847 aaPredicted RBP15.64■□□□□ 0.09
UBAP1-201ENST00000297661 SNX31Q8N9S9 440 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 SCAMP5Q8TAC9 235 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 ISL2Q96A47 359 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 SLCO4A1Q96BD0 722 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 TEKT5Q96M29 485 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 NDFIP2Q9NV92 336 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 XPR1Q9UBH6 696 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 PTBP2Q9UKA9 531 aaKnown RBP15.64■□□□□ 0.09
UBAP1-201ENST00000297661 ERGIC3Q9Y282 383 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 AURKAO14965 403 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 TIMM44O43615 452 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 PMPCBO75439 489 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 BDNFP23560 247 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 CHRNA4P43681 627 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 PGFP49763 221 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 ITGADQ13349 1161 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 TRIM25Q14258 630 aaKnown RBP15.64■□□□□ 0.09
UBAP1-201ENST00000297661 RFTN1Q14699 578 aaPredicted RBP15.64■□□□□ 0.09
UBAP1-201ENST00000297661 RAB39AQ14964 217 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 DEPDC1Q5TB30 811 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 SEL1L3Q68CR1 1132 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 HMBOX1Q6NT76 420 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 BHLHA9Q7RTU4 235 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 RNF135Q8IUD6 432 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 NXNL1Q96CM4 212 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 HDAC11Q96DB2 347 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 C1QTNF1Q9BXJ1 281 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 RNF208Q9H0X6 261 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 GIT1Q9Y2X7 761 aa15.64■□□□□ 0.09
UBAP1-201ENST00000297661 SOCS2O14508 198 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 MSI1O43347 362 aaKnown RBP15.63■□□□□ 0.09
UBAP1-201ENST00000297661 GRID2O43424 1007 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 TADA2AO75478 443 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 TFEBP19484 476 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 GNA12Q03113 381 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 ANO4Q32M45 955 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 ARL13BQ3SXY8 428 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 TMEM214Q6NUQ4 689 aaKnown RBP15.63■□□□□ 0.09
UBAP1-201ENST00000297661 ZNF467Q7Z7K2 595 aaPredicted RBP15.63■□□□□ 0.09
UBAP1-201ENST00000297661 CENPLQ8N0S6 344 aaPredicted RBP15.63■□□□□ 0.09
UBAP1-201ENST00000297661 CPSF7Q8N684 471 aaKnown RBP15.63■□□□□ 0.09
UBAP1-201ENST00000297661 STARD8Q92502 1023 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 PPWD1Q96BP3 646 aaKnown RBP15.63■□□□□ 0.09
UBAP1-201ENST00000297661 FICDQ9BVA6 458 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 IL22Q9GZX6 179 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 PDCD11Q14690 1871 aaKnown RBP15.63■□□□□ 0.09
UBAP1-201ENST00000297661 TSC2P49815 1807 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 HDAC3O15379 428 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 AKAP10O43572 662 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 ZNF182P17025 639 aaPredicted RBP15.63■□□□□ 0.09
UBAP1-201ENST00000297661 RPL14P50914 215 aaKnown RBP15.63■□□□□ 0.09
UBAP1-201ENST00000297661 SCNN1GP51170 649 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 CDH17Q12864 832 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 IRF5Q13568 498 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms