RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 REXO5Q96IC2 774 aaKnown RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 SLC4A5Q9BY07 1137 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OSBPL7Q9BZF2 842 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 TM9SF3Q9HD45 589 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 CHKBQ9Y259 395 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ANGPT4Q9Y264 503 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 DENND3A2RUS2 1198 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 EME2A4GXA9 379 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PRKYO43930 277 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 RLN1P04808 185 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CYP1A2P05177 515 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TFE3P19532 575 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 HALP42357 657 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PAGE2BQ5JRK9 111 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 C10orf62Q5T681 223 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 LRRC66Q68CR7 880 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TMEM53Q6P2H8 277 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NECAB2Q7Z6G3 386 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CLNKQ7Z7G1 428 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 UNC5BQ8IZJ1 945 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 UCMAQ8WVF2 138 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 S100A14Q9HCY8 104 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ARL15Q9NXU5 204 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 IRS4O14654 1257 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CASKO14936 926 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TADA2AO75478 443 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 IFNA1P01562 189 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 GNAO1P09471 354 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 HK1P19367 917 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CXCR2P25025 360 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ALDH1B1P30837 517 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 GALK1P51570 392 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 UGT2B15P54855 530 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 LIPMQ5VYY2 423 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CHSY1Q86X52 802 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 RCN3Q96D15 328 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 GSC2O15499 205 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 FOSL2P15408 326 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ADD1P35611 737 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 RANP62826 216 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TLE3Q04726 772 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CYP24A1Q07973 514 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PDZD9Q8IXQ8 264 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 Q8N402 240 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ACBD4Q8NC06 268 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NPAS2Q99743 824 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TM9SF2Q99805 663 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 FAM105AQ9NUU6 356 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 AFF4Q9UHB7 1163 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SCP2D1Q9UJQ7 156 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PER1O15534 1290 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SRPRAP08240 638 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PCSK1P29120 753 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 EIF2DP41214 584 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PNPLA4P41247 253 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 FAM47BQ8NA70 645 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ZFP28Q8NHY6 868 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 HTRA1Q92743 480 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TCF7L1Q9HCS4 588 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PHRF1Q9P1Y6 1649 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NFAT5O94916 1531 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PALLDQ8WX93 1383 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SLC35F4A4IF30 521 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CCRL2O00421 344 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TCEA3O75764 348 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SLC7A1P30825 629 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 DLSTP36957 453 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CBFBQ13951 182 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 DGCR6Q14129 220 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SV2CQ496J9 727 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 IDO2Q6ZQW0 420 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SSX6Q7RTT6 188 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 C16orf58Q96GQ5 468 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 RBM17Q96I25 401 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 KCTD7Q96MP8 289 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SECISBP2Q96T21 854 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NDFIP2Q9NV92 336 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TAS2R13Q9NYV9 303 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CALML5Q9NZT1 146 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 EVLQ9UI08 416 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PRR12Q9ULL5 1215 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NAALADL1Q9UQQ1 740 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NCKAP1Q9Y2A7 1128 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 FRMPD2Q68DX3 1309 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NRKQ7Z2Y5 1582 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 LAMB2P55268 1798 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 H0Y858 1186 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 M0R036 132 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SULT1C4O75897 302 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PTPN6P29350 595 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 GCLMP48507 274 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NKX6-1P78426 367 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 DPY19L1Q2PZI1 675 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SYTL3Q4VX76 610 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ATAD3CQ5T2N8 411 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 LRRC47Q8N1G4 583 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SDR16C5Q8N3Y7 309 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 LZTR1Q8N653 840 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms