RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 FKBPLQ9UIM3 349 aa13.24□□□□□ -0.29
RUBCN-202ENST00000296343 COMMD10Q9Y6G5 202 aa13.24□□□□□ -0.29
RUBCN-202ENST00000296343 A0A1B0GTL3 188 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 TEX28O15482 410 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 PSMD3O43242 534 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 SMAD6O43541 496 aaKnown RBP13.23□□□□□ -0.29
RUBCN-202ENST00000296343 TUFMP49411 452 aaKnown RBP13.23□□□□□ -0.29
RUBCN-202ENST00000296343 NAB1Q13506 487 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 INSCQ1MX18 579 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 FAM83EQ2M2I3 478 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 MUM1Q2TAK8 710 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 RABGAP1LQ5R372 815 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 ZNF549Q6P9A3 640 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 ZYG11AQ6WRX3 759 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 TMPRSS6Q8IU80 811 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 PIANPQ8IYJ0 282 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 PTERQ96BW5 349 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 NPAS2Q99743 824 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 MRPL9Q9BYD2 267 aaKnown RBP13.23□□□□□ -0.29
RUBCN-202ENST00000296343 YY1AP1Q9H869 796 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 HCFC1R1Q9NWW0 138 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 CCDC167Q9P0B6 97 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 C15orf41Q9Y2V0 281 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 H3BMM5 538 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 INPPL1O15357 1258 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 S1PR4O95977 384 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 PARP15Q460N3 678 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 ARMC12Q5T9G4 340 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 KIAA0930Q6ICG6 404 aaPredicted RBP13.23□□□□□ -0.29
RUBCN-202ENST00000296343 BEND5Q7L4P6 421 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 APCDD1Q8J025 514 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 APBB2Q92870 758 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 VPS45Q9NRW7 570 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 IGSF5Q9NSI5 407 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 LNPEPQ9UIQ6 1025 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 RAI2Q9Y5P3 530 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 GON4LQ3T8J9 2241 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 IGLV3-10A0A075B6K4 115 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 A8MT66 165 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 TBC1D4O60343 1298 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 NIPSNAP2O75323 286 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 MYL4P12829 197 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 GFAPP14136 432 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 MAGEA12P43365 314 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 ELAVL2Q12926 359 aaKnown RBP13.23□□□□□ -0.29
RUBCN-202ENST00000296343 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
RUBCN-202ENST00000296343 RIPK1Q13546 671 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 PREPLQ4J6C6 727 aaPredicted RBP13.23□□□□□ -0.29
RUBCN-202ENST00000296343 PSAPL1Q6NUJ1 521 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 CLDN19Q8N6F1 224 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 PCDH20Q8N6Y1 951 aaKnown RBP13.23□□□□□ -0.29
RUBCN-202ENST00000296343 MICAL1Q8TDZ2 1067 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 STYXQ8WUJ0 223 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 NRG4Q8WWG1 115 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 SLC30A3Q99726 388 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 SEMA4BQ9NPR2 832 aaPredicted RBP13.23□□□□□ -0.29
RUBCN-202ENST00000296343 MTRRQ9UBK8 725 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 BTRCQ9Y297 605 aa13.23□□□□□ -0.29
RUBCN-202ENST00000296343 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 TRIM24O15164 1050 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 SRP72O76094 671 aaKnown RBP13.22□□□□□ -0.29
RUBCN-202ENST00000296343 RHOBTB1O94844 696 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 TMCC1O94876 653 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 URODP06132 367 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 CHRM3P20309 590 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 PSEN1P49768 467 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 CLNS1AP54105 237 aaKnown RBP13.22□□□□□ -0.29
RUBCN-202ENST00000296343 PLA2G4EQ3MJ16 856 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 SLC8B1Q6J4K2 584 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 PAQR3Q6TCH7 311 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 OR4L1Q8NH43 312 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 CDKN2AIPNLQ96HQ2 116 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 CORO1BQ9BR76 489 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 SLC39A3Q9BRY0 314 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 MCMBPQ9BTE3 642 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 EVLQ9UI08 416 aaPredicted RBP13.22□□□□□ -0.29
RUBCN-202ENST00000296343 FAM92AA1XBS5 289 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 DRGXA6NNA5 263 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 HDAC3O15379 428 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 GRID2O43424 1007 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 CSKP41240 450 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 STK19P49842 368 aaPredicted RBP13.22□□□□□ -0.29
RUBCN-202ENST00000296343 RHOAP61586 193 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 ARF5P84085 180 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 CREB5Q02930 508 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 KLF10Q13118 480 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 VEPH1Q14D04 833 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 PTPRNQ16849 979 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 ADGRF1Q5T601 910 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 EPGNQ6UW88 154 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 GK5Q6ZS86 529 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 SDCCAG8Q86SQ7 713 aaPredicted RBP13.22□□□□□ -0.29
RUBCN-202ENST00000296343 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.22□□□□□ -0.29
RUBCN-202ENST00000296343 RCN3Q96D15 328 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 ELAC1Q9H777 363 aaKnown RBP13.22□□□□□ -0.29
RUBCN-202ENST00000296343 CATSPERZQ9NTU4 200 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 PPM1HQ9ULR3 514 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 TIMM22Q9Y584 194 aa13.22□□□□□ -0.29
RUBCN-202ENST00000296343 DOCK4Q8N1I0 1966 aa13.21□□□□□ -0.29
RUBCN-202ENST00000296343 MIA3Q5JRA6 1907 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms