RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 PRAMEP78395 509 aa19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 SLC39A12Q504Y0 691 aa19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 ISCA2Q86U28 154 aa19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 IMP4Q96G21 291 aaKnown RBP19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 TBATAQ96M53 351 aa19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 NOL11Q9H8H0 719 aaKnown RBP19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 PREBQ9HCU5 417 aa19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 SPAG4Q9NPE6 437 aa19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 UTP6Q9NYH9 597 aaKnown RBP19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 UXTQ9UBK9 157 aaPredicted RBP19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 SUCOQ9UBS9 1254 aaKnown RBP19.61■□□□□ 0.73
NKX6-1-201ENST00000295886 TIPRLO75663 272 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 PRSS56P0CW18 603 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 CKMT2P17540 419 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 MLLT6P55198 1093 aaPredicted RBP19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 GEN1Q17RS7 908 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 MARC1Q5VT66 337 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 AFMIDQ63HM1 303 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 PPWD1Q96BP3 646 aaKnown RBP19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 ZNF512Q96ME7 567 aaPredicted RBP19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 KCNA7Q96RP8 456 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 RNF11Q9Y3C5 154 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 NRP2O60462 931 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 HMBSP08397 361 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 RPL10P27635 214 aaKnown RBP19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 SOX11P35716 441 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 FOXA1P55317 472 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 TSPY1Q01534 308 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 PSMD5Q16401 504 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 SIRPB2Q5JXA9 342 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 C6orf10Q5SRN2 563 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 KIAA0408Q6ZU52 694 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 RETREG3Q86VR2 466 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 FUNDC1Q8IVP5 155 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 NSUN5Q96P11 429 aaKnown RBP19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 RGS18Q9NS28 235 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 TMCO1Q9UM00 188 aa19.6■□□□□ 0.73
NKX6-1-201ENST00000295886 B4GALT3O60512 393 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 S1PR4O95977 384 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 RBP1P09455 135 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 THPOP40225 353 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 SH3BGRP55822 239 aaPredicted RBP19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 SH3BP2P78314 561 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 RHDQ02161 417 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 ACAP2Q15057 778 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 KIF19Q2TAC6 998 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 CCDC117Q8IWD4 279 aaPredicted RBP19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 AHI1Q8N157 1196 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 PGBD5Q8N414 524 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 SP110Q9HB58 689 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 ARL5AQ9Y689 179 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 FNDC1Q4ZHG4 1894 aaPredicted RBP19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 NR5A2O00482 541 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 PENKP01210 267 aaPredicted RBP19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 PSMC3P17980 439 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 GRK4P32298 578 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 INHBCP55103 352 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 UNC50Q53HI1 259 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 ZNF678Q5SXM1 525 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 HMBOX1Q6NT76 420 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 MIB1Q86YT6 1006 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 TMEM126BQ8IUX1 230 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 AFAP1L2Q8N4X5 818 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 CALML6Q8TD86 181 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 BLOC1S5Q8TDH9 187 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 C19orf60Q96EN9 201 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 GALNT8Q9NY28 637 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 CROTQ9UKG9 612 aa19.59■□□□□ 0.73
NKX6-1-201ENST00000295886 PLOD2O00469 737 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 C8BP07358 591 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 UGT1A6P19224 532 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 CHRM3P20309 590 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 GRIA3P42263 894 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 USP46P62068 366 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 EFEMP1Q12805 493 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 IKBKEQ14164 716 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 LARP4Q71RC2 724 aaKnown RBP eCLIP19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 DIS3LQ8TF46 1054 aaKnown RBP19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 STON2Q8WXE9 905 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 CCDC126Q96EE4 140 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 MRPS26Q9BYN8 205 aaKnown RBP19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 ZNF696Q9H7X3 374 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 AKTIPQ9H8T0 292 aa19.58■□□□□ 0.73
NKX6-1-201ENST00000295886 SCN4AP35499 1836 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 SOAT2O75908 522 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 SRP72O76094 671 aaKnown RBP19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 ASLP04424 464 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 CYP11A1P05108 521 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 IMPDH1P20839 514 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 RENBPP51606 427 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 VPS26BQ4G0F5 336 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 ZNF549Q6P9A3 640 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 THEM5Q8N1Q8 247 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 PTGR2Q8N8N7 351 aaPredicted RBP19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 TSPAN17Q96FV3 270 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 FAR2Q96K12 515 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 ADAM2Q99965 735 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 SLC2A11Q9BYW1 496 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 EGFL7Q9UHF1 273 aa19.58■□□□□ 0.72
NKX6-1-201ENST00000295886 CNOT6Q9ULM6 557 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms