RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 SCUBE2Q9NQ36 999 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 OXSMQ9NWU1 459 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.18□□□□□ -0.94
PDPN-201ENST00000294489 VPS51Q9UID3 782 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CCL26Q9Y258 94 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 TRAFD1O14545 582 aaPredicted RBP9.18□□□□□ -0.94
PDPN-201ENST00000294489 KLHL2O95198 593 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CRTAMO95727 393 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 KRT16P08779 473 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CALB2P22676 271 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 GLRBP48167 497 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 TAS2R39P59534 338 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 DUSP6Q16828 381 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 LIPMQ5VYY2 423 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 FAM91A1Q658Y4 838 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 LRRC8EQ6NSJ5 796 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CNSTQ6PJW8 725 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 ZYG11AQ6WRX3 759 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 ALYREFQ86V81 257 aaKnown RBP9.18□□□□□ -0.94
PDPN-201ENST00000294489 CEP97Q8IW35 865 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 FSTL5Q8N475 847 aaPredicted RBP9.18□□□□□ -0.94
PDPN-201ENST00000294489 OR6Y1Q8NGX8 325 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 SCG3Q8WXD2 468 aaKnown RBP9.18□□□□□ -0.94
PDPN-201ENST00000294489 ACDQ96AP0 544 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 VOPP1Q96AW1 172 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 RMDN1Q96DB5 314 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 TDRD1Q9BXT4 1180 aaKnown RBP9.18□□□□□ -0.94
PDPN-201ENST00000294489 NMUR2Q9GZQ4 415 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 MARK1Q9P0L2 795 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 APOBEC2Q9Y235 224 aaKnown RBP9.18□□□□□ -0.94
PDPN-201ENST00000294489 CHD9Q3L8U1 2897 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 TK2O00142 265 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 FZD6O60353 706 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 TMCC1O94876 653 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 GLP2RO95838 553 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 ESRRAP11474 423 aaPredicted RBP9.17□□□□□ -0.94
PDPN-201ENST00000294489 MAGEA10P43363 369 aaPredicted RBP9.17□□□□□ -0.94
PDPN-201ENST00000294489 RIPK1Q13546 671 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 TBCCQ15814 346 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 FAM83EQ2M2I3 478 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 MRNIPQ6NTE8 343 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 METTL3Q86U44 580 aaKnown RBP9.17□□□□□ -0.94
PDPN-201ENST00000294489 CENPLQ8N0S6 344 aaPredicted RBP9.17□□□□□ -0.94
PDPN-201ENST00000294489 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDPN-201ENST00000294489 GPR150Q8NGU9 434 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 STYXQ8WUJ0 223 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 SLC7A6OSQ96CW6 309 aaPredicted RBP9.17□□□□□ -0.94
PDPN-201ENST00000294489 SORT1Q99523 831 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 OMDQ99983 421 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 C19orf43Q9BQ61 176 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 KIAA1522Q9P206 1035 aaPredicted RBP9.17□□□□□ -0.94
PDPN-201ENST00000294489 SORCS3Q9UPU3 1222 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 NUMBLQ9Y6R0 609 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 COL4A3Q01955 1670 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 ZNF197O14709 1029 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 SNAP91O60641 907 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 RPP40O75818 363 aaKnown RBP9.17□□□□□ -0.94
PDPN-201ENST00000294489 SERPINA6P08185 405 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 ARSDP51689 593 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 SLC20A2Q08357 652 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 ZNF460Q14592 562 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 CFAP157Q5JU67 520 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 KLC3Q6P597 504 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 ADGRD2Q7Z7M1 963 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 MFN1Q8IWA4 741 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 MFSD6LQ8IWD5 586 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 APCDD1Q8J025 514 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 NXNL1Q96CM4 212 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 OTUB2Q96DC9 234 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 EXOC2Q96KP1 924 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 TBATAQ96M53 351 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 MRPL46Q9H2W6 279 aaKnown RBP9.17□□□□□ -0.94
PDPN-201ENST00000294489 TDP1Q9NUW8 608 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 ARL8BQ9NVJ2 186 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 XPR1Q9UBH6 696 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 BAIAP2L1Q9UHR4 511 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 CLEC4EQ9ULY5 219 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 HCFC2Q9Y5Z7 792 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 ARL5AQ9Y689 179 aa9.17□□□□□ -0.94
PDPN-201ENST00000294489 MUC22E2RYF6 1773 aaPredicted RBP9.17□□□□□ -0.94
PDPN-201ENST00000294489 AURKAO14965 403 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 ZNF821O75541 412 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 HOXB8P17481 243 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 LMAN2Q12907 356 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 CDH18Q13634 790 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 HSF5Q4G112 596 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 AGAP9Q5VTM2 703 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 SDCCAG8Q86SQ7 713 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 TTC7BQ86TV6 843 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 MICAL1Q8TDZ2 1067 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 DNAJC1Q96KC8 554 aaKnown RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 NDNQ99608 321 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 MRPL57Q9BQC6 102 aaKnown RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 ADGRE3Q9BY15 652 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 SMG9Q9H0W8 520 aaKnown RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 ABCB8Q9NUT2 735 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 PNPOQ9NVS9 261 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.16□□□□□ -0.94
PDPN-201ENST00000294489 DNAJC28Q9NX36 388 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 ARMCX1Q9P291 453 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms