RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 C6orf163Q5TEZ5 329 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 C1orf146Q5VVC0 180 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 METTL21CQ5VZV1 264 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 TPGS2Q68CL5 300 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 ALG1LQ6GMV1 187 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 CNKSR3Q6P9H4 555 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 DNAJB7Q7Z6W7 309 aaPredicted RBP14.03□□□□□ -0.16
NXF1-201ENST00000294172 GALNT7Q86SF2 657 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 LMNTD2Q8IXW0 634 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 CFAP61Q8NHU2 1237 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 PDCD6IPQ8WUM4 868 aaKnown RBP14.03□□□□□ -0.16
NXF1-201ENST00000294172 BHMTQ93088 406 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 UBXN10Q96LJ8 280 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 KLF16Q9BXK1 252 aaPredicted RBP14.03□□□□□ -0.16
NXF1-201ENST00000294172 CATSPERZQ9NTU4 200 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 VTI1BQ9UEU0 232 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 PCDHGC4Q9Y5F7 938 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 LAMA3Q16787 3333 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 MICAL3Q7RTP6 2002 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 A8MT66 165 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 IPO13O94829 963 aaKnown RBP14.03□□□□□ -0.16
NXF1-201ENST00000294172 CRTAMO95727 393 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 C1RP00736 705 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 RBP1P09455 135 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 SPATA31D3P0C874 917 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 CA8P35219 290 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 SMAD3P84022 425 aaKnown RBP14.03□□□□□ -0.16
NXF1-201ENST00000294172 BTG3Q14201 252 aaPredicted RBP14.03□□□□□ -0.16
NXF1-201ENST00000294172 NAA25Q14CX7 972 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 CYTH1Q15438 398 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 TMEM198Q66K66 360 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 FAM45BPQ6NSW5 357 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 ZNF549Q6P9A3 640 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 RIPOR1Q6ZS17 1223 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 SPATA31D4Q6ZUB0 917 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 FRMD7Q6ZUT3 714 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 GLT6D1Q7Z4J2 308 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 SDCCAG8Q86SQ7 713 aaPredicted RBP14.03□□□□□ -0.16
NXF1-201ENST00000294172 SETD3Q86TU7 594 aaPredicted RBP14.03□□□□□ -0.16
NXF1-201ENST00000294172 KIRREL3Q8IZU9 778 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 CARNMT1Q8N4J0 409 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 LPCAT1Q8NF37 534 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 SHKBP1Q8TBC3 707 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 FAM45AQ8TCE6 357 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 ZNF570Q96NI8 536 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 TMEM39AQ9NV64 488 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 SSX2IPQ9Y2D8 614 aa14.03□□□□□ -0.16
NXF1-201ENST00000294172 A0A088AWK7 358 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 SLCO1B7G3V0H7 640 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 H0Y626 953 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 NPHS1O60500 1241 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 SNAP91O60641 907 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 URODP06132 367 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 PDHA1P08559 390 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 COX4I1P13073 169 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 CD1EP15812 388 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 HK2P52789 917 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 EPHB1P54762 984 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 DNAJB13P59910 316 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 PFKPQ01813 784 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 SLC14A2Q15849 920 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 CHST9Q7L1S5 443 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 NET1Q7Z628 596 aaPredicted RBP14.02□□□□□ -0.16
NXF1-201ENST00000294172 SLC39A11Q8N1S5 342 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 KDM1BQ8NB78 822 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 OR4K2Q8NGD2 314 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 EXT2Q93063 718 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 CDKN2AIPNLQ96HQ2 116 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 MARK4Q96L34 752 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 LENG8Q96PV6 779 aaPredicted RBP14.02□□□□□ -0.16
NXF1-201ENST00000294172 PANX3Q96QZ0 392 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 SLC22A12Q96S37 553 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 RETREG1Q9H6L5 497 aa14.02□□□□□ -0.16
NXF1-201ENST00000294172 FNDC3AQ9Y2H6 1198 aaKnown RBP14.02□□□□□ -0.16
NXF1-201ENST00000294172 UBA6A0AVT1 1052 aaPredicted RBP14.02□□□□□ -0.17
NXF1-201ENST00000294172 TBL1XO60907 577 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 DEFB103AP81534 67 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 RFTN1Q14699 578 aaPredicted RBP14.02□□□□□ -0.17
NXF1-201ENST00000294172 EML3Q32P44 896 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 CXorf57Q6NSI4 855 aaKnown RBP14.02□□□□□ -0.17
NXF1-201ENST00000294172 HERC6Q8IVU3 1022 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 DIS3LQ8TF46 1054 aaKnown RBP14.02□□□□□ -0.17
NXF1-201ENST00000294172 PEX13Q92968 403 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 TOP1MTQ969P6 601 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 VWCEQ96DN2 955 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 CCDC126Q96EE4 140 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 TRMT2BQ96GJ1 504 aaKnown RBP14.02□□□□□ -0.17
NXF1-201ENST00000294172 CNDP1Q96KN2 507 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 CATSPER2Q96P56 530 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 TDRD1Q9BXT4 1180 aaKnown RBP14.02□□□□□ -0.17
NXF1-201ENST00000294172 STOML1Q9UBI4 398 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 TBC1D30Q9Y2I9 924 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 RAI2Q9Y5P3 530 aa14.02□□□□□ -0.17
NXF1-201ENST00000294172 TANC1Q9C0D5 1861 aa14.01□□□□□ -0.17
NXF1-201ENST00000294172 SKAP2O75563 359 aaPredicted RBP14.01□□□□□ -0.17
NXF1-201ENST00000294172 CR2P20023 1033 aa14.01□□□□□ -0.17
NXF1-201ENST00000294172 KCNC1P48547 511 aa14.01□□□□□ -0.17
NXF1-201ENST00000294172 EPHB3P54753 998 aa14.01□□□□□ -0.17
NXF1-201ENST00000294172 ARF5P84085 180 aa14.01□□□□□ -0.17
NXF1-201ENST00000294172 TRMT5Q32P41 509 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms