RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 OR13C4Q8NGS5 318 aa20.04■□□□□ 0.8
CXCL16-201ENST00000293778 PYDC1Q8WXC3 89 aa20.04■□□□□ 0.8
CXCL16-201ENST00000293778 PHF21BQ96EK2 531 aa20.04■□□□□ 0.8
CXCL16-201ENST00000293778 FAR2Q96K12 515 aa20.04■□□□□ 0.8
CXCL16-201ENST00000293778 ZNF184Q99676 751 aaPredicted RBP20.04■□□□□ 0.8
CXCL16-201ENST00000293778 MGME1Q9BQP7 344 aa20.04■□□□□ 0.8
CXCL16-201ENST00000293778 RETREG1Q9H6L5 497 aa20.04■□□□□ 0.8
CXCL16-201ENST00000293778 ALG9Q9H6U8 611 aa20.04■□□□□ 0.8
CXCL16-201ENST00000293778 FIS1Q9Y3D6 152 aa20.04■□□□□ 0.8
CXCL16-201ENST00000293778 GNRH1P01148 92 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 PDHA1P08559 390 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 OR1D2P34982 312 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 TUFMP49411 452 aaKnown RBP20.03■□□□□ 0.8
CXCL16-201ENST00000293778 RPS24P62847 133 aaKnown RBP20.03■□□□□ 0.8
CXCL16-201ENST00000293778 SATB1Q01826 763 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 ADGRG6Q86SQ4 1221 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 DENND1CQ8IV53 801 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 KBTBD2Q8IY47 623 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 LRRC43Q8N309 656 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 CEP70Q8NHQ1 597 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 CEP295NLQ96MC4 621 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 TRIB3Q96RU7 358 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 CINPQ9BW66 212 aaPredicted RBP20.03■□□□□ 0.8
CXCL16-201ENST00000293778 ZBTB26Q9HCK0 441 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 MTRRQ9UBK8 725 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 UBA2Q9UBT2 640 aaPredicted RBP20.03■□□□□ 0.8
CXCL16-201ENST00000293778 PRPF19Q9UMS4 504 aaKnown RBP20.03■□□□□ 0.8
CXCL16-201ENST00000293778 COPG1Q9Y678 874 aaKnown RBP20.03■□□□□ 0.8
CXCL16-201ENST00000293778 SKAP2O75563 359 aaPredicted RBP20.03■□□□□ 0.8
CXCL16-201ENST00000293778 FDXRP22570 491 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 SP100P23497 879 aaPredicted RBP20.03■□□□□ 0.8
CXCL16-201ENST00000293778 OXCT1P55809 520 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 HECTD3Q5T447 861 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 ZNF549Q6P9A3 640 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 CUZD1Q86UP6 607 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 SH3RF2Q8TEC5 729 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 PSKH2Q96QS6 385 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 SEZ6LQ9BYH1 1024 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 CATSPERZQ9NTU4 200 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 RIMKLBQ9ULI2 386 aa20.03■□□□□ 0.8
CXCL16-201ENST00000293778 CORO1CQ9ULV4 474 aaPredicted RBP20.03■□□□□ 0.8
CXCL16-201ENST00000293778 ZNF840PA6NDX5 716 aa20.02■□□□□ 0.8
CXCL16-201ENST00000293778 H3BNC9 293 aa20.02■□□□□ 0.8
CXCL16-201ENST00000293778 HOXB8P17481 243 aaPredicted RBP20.02■□□□□ 0.8
CXCL16-201ENST00000293778 SEMA3AQ14563 771 aa20.02■□□□□ 0.8
CXCL16-201ENST00000293778 DEFB115Q30KQ5 88 aa20.02■□□□□ 0.8
CXCL16-201ENST00000293778 RPS27LQ71UM5 84 aaKnown RBP20.02■□□□□ 0.8
CXCL16-201ENST00000293778 ISCA2Q86U28 154 aa20.02■□□□□ 0.8
CXCL16-201ENST00000293778 DSELQ8IZU8 1212 aa20.02■□□□□ 0.8
CXCL16-201ENST00000293778 OR4L1Q8NH43 312 aa20.02■□□□□ 0.8
CXCL16-201ENST00000293778 OVCA2Q8WZ82 227 aa20.02■□□□□ 0.8
CXCL16-201ENST00000293778 FAM136AQ96C01 138 aa20.02■□□□□ 0.8
CXCL16-201ENST00000293778 RCN3Q96D15 328 aa20.02■□□□□ 0.8
CXCL16-201ENST00000293778 PRICKLE1Q96MT3 831 aaPredicted RBP20.02■□□□□ 0.8
CXCL16-201ENST00000293778 MTF2Q9Y483 593 aaPredicted RBP20.02■□□□□ 0.8
CXCL16-201ENST00000293778 TET1Q8NFU7 2136 aa20.02■□□□□ 0.79
CXCL16-201ENST00000293778 EIF4E1BA6NMX2 242 aaKnown RBP20.02■□□□□ 0.79
CXCL16-201ENST00000293778 COCHO43405 550 aa20.02■□□□□ 0.79
CXCL16-201ENST00000293778 KDELR3O43731 214 aa20.02■□□□□ 0.79
CXCL16-201ENST00000293778 OGNP20774 298 aaKnown RBP20.02■□□□□ 0.79
CXCL16-201ENST00000293778 IMPDH1P20839 514 aa20.02■□□□□ 0.79
CXCL16-201ENST00000293778 USP41Q3LFD5 358 aa20.02■□□□□ 0.79
CXCL16-201ENST00000293778 SDCCAG8Q86SQ7 713 aaPredicted RBP20.02■□□□□ 0.79
CXCL16-201ENST00000293778 SERPINI1Q99574 410 aa20.02■□□□□ 0.79
CXCL16-201ENST00000293778 CLDN11O75508 207 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 RGRP47804 291 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 KCNC1P48547 511 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 ALDH7A1P49419 539 aaKnown RBP20.01■□□□□ 0.79
CXCL16-201ENST00000293778 KLC1Q07866 573 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 GALNT1Q10472 559 aaPredicted RBP20.01■□□□□ 0.79
CXCL16-201ENST00000293778 KLHDC10Q6PID8 442 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 FAM43BQ6ZT52 329 aaPredicted RBP20.01■□□□□ 0.79
CXCL16-201ENST00000293778 DHDDSQ86SQ9 333 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 HIPK4Q8NE63 616 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 PLD4Q96BZ4 506 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 SCLYQ96I15 445 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 GSTO2Q9H4Y5 243 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 TNFRSF12AQ9NP84 129 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 CHD5Q8TDI0 1954 aa20.01■□□□□ 0.79
CXCL16-201ENST00000293778 CRTAMO95727 393 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 SCNN1BP51168 640 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 PELI3Q8N2H9 469 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 MICAL1Q8TDZ2 1067 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 PTERQ96BW5 349 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 TRMOQ9BU70 441 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 MEAF6Q9HAF1 191 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 BACE2Q9Y5Z0 518 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 SMNDC1O75940 238 aaKnown RBP eCLIP20■□□□□ 0.79
CXCL16-201ENST00000293778 PENKP01210 267 aaPredicted RBP20■□□□□ 0.79
CXCL16-201ENST00000293778 KLKB1P03952 638 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 RHOCP08134 193 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 CD1DP15813 335 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 PMLP29590 882 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 CORO1AP31146 461 aaKnown RBP20■□□□□ 0.79
CXCL16-201ENST00000293778 STC1P52823 247 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 MRPS35P82673 323 aaKnown RBP20■□□□□ 0.79
CXCL16-201ENST00000293778 TIAL1Q01085 375 aaKnown RBP eCLIP20■□□□□ 0.792e-7■■□□□ 13.9
CXCL16-201ENST00000293778 IRGCQ6NXR0 463 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 IZUMO2Q6UXV1 221 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 BNC2Q6ZN30 1099 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms