RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20■□□□□ 0.79
SCUBE1-201ENST00000290460 PCDHGB4Q9UN71 923 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 TRAF6Q9Y4K3 522 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 PCDHGB5Q9Y5G0 923 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 LOC285095A0A1B0GVY8 99 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 SLC12A8A0AV02 714 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 PSMD12O00232 456 aaPredicted RBP20■□□□□ 0.79
SCUBE1-201ENST00000290460 INPPL1O15357 1258 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 TRPA1O75762 1119 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 GRIA2P42262 883 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 POLE2P56282 527 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 TAF10Q12962 218 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 CTXN3Q4LDR2 81 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 SAPCD2Q86UD0 394 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 OR13C4Q8NGS5 318 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 GABPB2Q8TAK5 448 aaPredicted RBP20■□□□□ 0.79
SCUBE1-201ENST00000290460 CRISPLD1Q9H336 500 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 PPP6CO00743 305 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 SNUPNO95149 360 aaKnown RBP19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 GOT2P00505 430 aaKnown RBP19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 PRSS56P0CW18 603 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 ELNP15502 786 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 IMPDH1P20839 514 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 CAP1Q01518 475 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 RALGDSQ12967 914 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 SERINC3Q13530 473 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 TRIP4Q15650 581 aaPredicted RBP19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 ZNF678Q5SXM1 525 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 RARS2Q5T160 578 aaKnown RBP19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 REP15Q6BDI9 236 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 PAOXQ6QHF9 649 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 ST13P4Q8IZP2 240 aaPredicted RBP19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 CFAP52Q8N1V2 620 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 FATE1Q969F0 183 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 TADA1Q96BN2 335 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 FAR2Q96K12 515 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 BTBD9Q96Q07 612 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 SPATS2LQ9NUQ6 558 aaKnown RBP19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 CACNA2D2Q9NY47 1150 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 LRRC14BA6NHZ5 514 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 AHCYL1O43865 530 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 TIAL1Q01085 375 aaKnown RBP eCLIP19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 SQLEQ14534 574 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 ZFP1Q6P2D0 407 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 UGT2A3Q6UWM9 527 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 LAYNQ6UX15 382 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 SLC24A5Q71RS6 500 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 SLC22A9Q8IVM8 553 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 ARHGAP18Q8N392 663 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 AFAP1L2Q8N4X5 818 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 C3orf30Q96M34 536 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 POLR3BQ9NW08 1133 aaPredicted RBP19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 PTGDR2Q9Y5Y4 395 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 AK5Q9Y6K8 562 aa19.99■□□□□ 0.79
SCUBE1-201ENST00000290460 C15orf38-AP3S2A0A0A6YYH1 394 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 GPC4O75487 556 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 SIX3O95343 332 aaPredicted RBP19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 CKBP12277 381 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 FCGRTP55899 365 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 IL10RBQ08334 325 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 LRP8Q14114 963 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 UNC50Q53HI1 259 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 FAM26DQ5JW98 314 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 FAM171A1Q5VUB5 890 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 NADSYN1Q6IA69 706 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 SLC30A9Q6PML9 568 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 ARPINQ7Z6K5 226 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 GALNT7Q86SF2 657 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 SEPT5Q99719 369 aaPredicted RBP19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 FAM192AQ9GZU8 254 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 CCSER2Q9H7U1 834 aa19.98■□□□□ 0.79
SCUBE1-201ENST00000290460 PRSS51A0A1B0GVH4 220 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 CCDC162PA2VCL2 907 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 TRIM38O00635 465 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 DNAJA2O60884 412 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 PRKAR2AP13861 404 aaKnown RBP19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 NKX3-2P78367 333 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 IRX1P78414 480 aaPredicted RBP19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 GRM2Q14416 872 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 ATP6V1E2Q96A05 226 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 POLR1EQ9GZS1 481 aaKnown RBP19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 UBAP1Q9NZ09 502 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 A0A0D9SEW6 157 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 CD3EAPO15446 510 aaKnown RBP19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 RNASEH2AO75792 299 aaKnown RBP19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 GLP2RO95838 553 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 CD1DP15813 335 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 CHN2P52757 468 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 INHBCP55103 352 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 GK3PQ14409 553 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 ZNF235Q14590 738 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 MGAT5BQ3V5L5 792 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 LIN52Q52LA3 116 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 IL23RQ5VWK5 629 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 FAM45BPQ6NSW5 357 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 GALNT4Q8N4A0 578 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 FAM45AQ8TCE6 357 aa19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 FAM193BQ96PV7 902 aaPredicted RBP19.97■□□□□ 0.79
SCUBE1-201ENST00000290460 SLC39A3Q9BRY0 314 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms