RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ALDH4A1P30038 563 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 NFE2Q16621 373 aaPredicted RBP15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 CPSF6Q16630 551 aaKnown RBP eCLIP15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 AFTPHQ6ULP2 937 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 OR2T34Q8NGX1 318 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 OR2T3Q8NH03 318 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 CSPG4P5Q96PW8 444 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 MSI1O43347 362 aaKnown RBP15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 PSEN2P49810 448 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 ATN1P54259 1190 aaPredicted RBP15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 LSM12Q3MHD2 195 aaKnown RBP15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 MZT2BQ6NZ67 158 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 OSBPL6Q9BZF3 934 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 GOLGA2P5Q9HBQ8 144 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 SIX2Q9NPC8 291 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 CRNNQ9UBG3 495 aaPredicted RBP15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 GNPTGQ9UJJ9 305 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 SNX6Q9UNH7 406 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 TNPO3Q9Y5L0 923 aaKnown RBP15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 SPACA6W5XKT8 324 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 TMCC2O75069 709 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 IDO1P14902 403 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 AQP1P29972 269 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 RXRGP48443 463 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 MRPS5P82675 430 aaKnown RBP15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 PAOXQ6QHF9 649 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 CLYBLQ8N0X4 340 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 AMER2Q8N7J2 671 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 RPS6KA6Q9UK32 745 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 PMF1-BGLAPU3KQ54 211 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 PLOD3O60568 738 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 IGSF6O95976 241 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 FGRP09769 529 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 FCGRTP55899 365 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 PFKPQ01813 784 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 NDUFA5Q16718 116 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 UNC93AQ86WB7 457 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 CCDC185Q8N715 623 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 PLD5Q8N7P1 536 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 EPB41L4BQ9H329 900 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 SNX10Q9Y5X0 201 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 ANKRD26Q9UPS8 1709 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 ATP6V1G1O75348 118 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 ANXA5P08758 320 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 UMPSP11172 480 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 MATKP42679 507 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 OAZ1P54368 228 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 IRF8Q02556 426 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 EPS8Q12929 822 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 RFX4Q33E94 735 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 SDE2Q6IQ49 451 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 RHBDF2Q6PJF5 856 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 AHSPQ9NZD4 102 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 GRM3Q14832 879 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 CBR4Q8N4T8 237 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 KLHL32Q96NJ5 620 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 SLC27A5Q9Y2P5 690 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 ANKDD1BA6NHY2 528 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 ULK1O75385 1050 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 URODP06132 367 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 SIM2Q14190 667 aaPredicted RBP15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 GPR158Q5T848 1215 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 ATAD3BQ5T9A4 648 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 ARMC8Q8IUR7 673 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 PANX1Q96RD7 426 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 PTPN5P54829 565 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 ITGA1P56199 1179 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 IRF9Q00978 393 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 ARL13AQ5H913 290 aaPredicted RBP15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 HECTD2Q5U5R9 776 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 OGFOD2Q6N063 350 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 PANX3Q96QZ0 392 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 RHBGQ9H310 441 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 ZDHHC18Q9NUE0 388 aa15.36■□□□□ 0.05
SHROOM4-201ENST00000289292 SLC28A1O00337 649 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 NRLP54845 237 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 OR4L1Q8NH43 312 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 AGAP2Q99490 1192 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 MLPHQ9BV36 600 aaPredicted RBP15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 ZYG11BQ9C0D3 744 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 SSNA1O43805 119 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 PURAQ00577 322 aaKnown RBP15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 ABRQ12979 859 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 TMEM132BQ14DG7 1078 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 CDC73Q6P1J9 531 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 FAM151BQ6UXP7 276 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 OR4A15Q8NGL6 344 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 NFKBIZQ9BYH8 718 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 UXTQ9UBK9 157 aaPredicted RBP15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 WBP11Q9Y2W2 641 aaKnown RBP15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 VWA7Q9Y334 891 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 TCRBV7S3A2A0A539 114 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 MC4RP32245 332 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 SLC9B1Q4ZJI4 515 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 SH3PXD2AQ5TCZ1 1133 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 GLYATQ6IB77 296 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 TWIST2Q8WVJ9 160 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 PPP3R2Q96LZ3 170 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms