RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TCRBV7S3A2A0A539 114 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 CHURC1-FNTBB4DL54 471 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 NDUFAB1O14561 156 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 PGLSO95336 258 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 MYBL2P10244 700 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 BCL2L1Q07817 233 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 NAB1Q13506 487 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 ZNF234Q14588 700 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 SLC1A5Q15758 541 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 OR2A12Q8NGT7 310 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 OR8D1Q8WZ84 308 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 VOPP1Q96AW1 172 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 VMP1Q96GC9 406 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 FICDQ9BVA6 458 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 VIPAS39Q9H9C1 493 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 FETUBQ9UGM5 382 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 PHTF1Q9UMS5 762 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 MRPS17Q9Y2R5 130 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 MYLKQ15746 1914 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 SDR42E2A6NKP2 422 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 SMAD6O43541 496 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 ADH1BP00325 375 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 MT-CO1P00395 513 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 STK19P49842 368 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 CAMK2GQ13555 558 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 RCN2Q14257 317 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 TRADDQ15628 312 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 SCG3Q8WXD2 468 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 FAM131CQ96AQ9 280 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 DACT3Q96B18 629 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 FAM136AQ96C01 138 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 PPP1R16AQ96I34 528 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 ASB2Q96Q27 587 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 SCML1Q9UN30 329 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 RAI2Q9Y5P3 530 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 TEX264Q9Y6I9 313 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 FAM237BA0A1B0GVD1 139 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 EIF4E1BA6NMX2 242 aaKnown RBP8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 RGRP47804 291 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 ATP1A2P50993 1020 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 GTF2H3Q13889 308 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 CCINQ13939 588 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 ELAVL3Q14576 367 aaKnown RBP8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 BEND6Q5SZJ8 279 aaPredicted RBP8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 FNBP1LQ5T0N5 605 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 DENND5AQ6IQ26 1287 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 ZNF852Q6ZMS4 543 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 PTPRN2Q92932 1015 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 SGSM3Q96HU1 749 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 KIFC1Q9BW19 673 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 SENP1Q9P0U3 644 aa8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 PNMA8BQ9ULN7 279 aaPredicted RBP8.46□□□□□ -1.05
PTPDC1-201ENST00000288976 PDZK1P1A8MUH7 402 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 SCNN1BP51168 640 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 PMS2P54278 862 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 PCID2Q5JVF3 399 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 SPANXN3Q5MJ09 141 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 ARMC12Q5T9G4 340 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 LRIG3Q6UXM1 1119 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 PPHLN1Q8NEY8 458 aaKnown RBP8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM76AQ8TAV0 307 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 NELL2Q99435 816 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 HDAC8Q9BY41 377 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 VPS11Q9H270 941 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 EPC1Q9H2F5 836 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 BFARQ9NZS9 450 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 SOX13Q9UN79 622 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 ACTL7AQ9Y615 435 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 SLC30A1Q9Y6M5 507 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 SHISA7A6NL88 538 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 TTC34A8MYJ7 566 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 K7ERQ8 282 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 PRPF4O43172 522 aaKnown RBP eCLIP8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 RNASEH1O60930 286 aaKnown RBP8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 USP1O94782 785 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 LIG3P49916 1009 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 MNAT1P51948 309 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 MAXP61244 160 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 POLR2LP62875 67 aaKnown RBP8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 TFF2Q03403 129 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 SFSWAPQ12872 951 aaKnown RBP8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 MSLNQ13421 630 aaPredicted RBP8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 POM121L1PQ3SYA9 428 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 SIRPB2Q5JXA9 342 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 EOGTQ5NDL2 527 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 C9orf64Q5T6V5 341 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 KIAA1324Q6UXG2 1013 aaKnown RBP8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 PHACTR4Q8IZ21 702 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 IPMKQ8NFU5 416 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 SPATA22Q8NHS9 363 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 DTX3LQ8TDB6 740 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 CYB5D2Q8WUJ1 264 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM3CQ92520 227 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 SPACA7Q96KW9 195 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 MCCC1Q96RQ3 725 aaPredicted RBP8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 GPR63Q9BZJ6 419 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 MAGEE1Q9HCI5 957 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 HEBP1Q9NRV9 189 aa8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 C6orf203Q9P0P8 240 aaPredicted RBP8.46□□□□□ -1.06
PTPDC1-201ENST00000288976 WASF2Q9Y6W5 498 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms