RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 LPCAT1Q8NF37 534 aa19.33■□□□□ 0.68
BRAF-201ENST00000288602 GABPB2Q8TAK5 448 aaPredicted RBP19.33■□□□□ 0.68
BRAF-201ENST00000288602 DTX3LQ8TDB6 740 aa19.33■□□□□ 0.68
BRAF-201ENST00000288602 ZNF689Q96CS4 500 aaPredicted RBP19.33■□□□□ 0.68
BRAF-201ENST00000288602 ZFRQ96KR1 1074 aaKnown RBP19.33■□□□□ 0.68
BRAF-201ENST00000288602 H0Y626 953 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 TBL1XO60907 577 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 PARNO95453 639 aaKnown RBP19.32■□□□□ 0.68
BRAF-201ENST00000288602 CD160O95971 181 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 ARSAP15289 507 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 TSPAN8P19075 237 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 GNAZP19086 355 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 CR2P20023 1033 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 ATP5F1P24539 256 aaPredicted RBP19.32■□□□□ 0.68
BRAF-201ENST00000288602 CDKN1CP49918 316 aaPredicted RBP19.32■□□□□ 0.68
BRAF-201ENST00000288602 TIAL1Q01085 375 aaKnown RBP eCLIP19.32■□□□□ 0.689e-10■■■■■ 32
BRAF-201ENST00000288602 TPGS2Q68CL5 300 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 NXNQ6DKJ4 435 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 FRMD7Q6ZUT3 714 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 EFCAB3Q8N7B9 438 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 OR4K2Q8NGD2 314 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 OR4L1Q8NH43 312 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 EXT2Q93063 718 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 CDKN2AIPNLQ96HQ2 116 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 MMADHCQ9H3L0 296 aaPredicted RBP19.32■□□□□ 0.68
BRAF-201ENST00000288602 TNFRSF12AQ9NP84 129 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 CATSPERZQ9NTU4 200 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 GTSE1Q9NYZ3 720 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.32■□□□□ 0.68
BRAF-201ENST00000288602 A8MT66 165 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 TM7SF2O76062 418 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 URODP06132 367 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 ACRP10323 421 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 CSF2RAP15509 400 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 DNAJB1P25685 340 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 ACVR1Q04771 509 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 RCN1Q15293 331 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 GLT6D1Q7Z4J2 308 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 WFDC5Q8TCV5 224 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 CEP295NLQ96MC4 621 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 TOX2Q96NM4 488 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 NCKIPSDQ9NZQ3 722 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 SLC7A8Q9UHI5 535 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 TBC1D30Q9Y2I9 924 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 ANKRD36A6QL64 1941 aa19.32■□□□□ 0.68
BRAF-201ENST00000288602 MAGEC1O60732 1142 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 MYL4P12829 197 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 BMP1P13497 986 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 KLC3Q6P597 504 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 TSPAN17Q96FV3 270 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 LENG8Q96PV6 779 aaPredicted RBP19.31■□□□□ 0.68
BRAF-201ENST00000288602 PANX3Q96QZ0 392 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 TDRD1Q9BXT4 1180 aaKnown RBP19.31■□□□□ 0.68
BRAF-201ENST00000288602 DCLRE1BQ9H816 532 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 BPIFA1Q9NP55 256 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 SAGE1Q9NXZ1 904 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 INSL5Q9Y5Q6 135 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 CDH23Q9H251 3354 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 PDE4DIPQ5VU43 2346 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 UBA6A0AVT1 1052 aaPredicted RBP19.31■□□□□ 0.68
BRAF-201ENST00000288602 PMLP29590 882 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 ABL2P42684 1182 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 RAP1GDS1P52306 607 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 PRKAA2P54646 552 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 PFKPQ01813 784 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 KLF10Q13118 480 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 SLC14A2Q15849 920 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 PPM1LQ5SGD2 360 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 MRNIPQ6NTE8 343 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 SETD3Q86TU7 594 aaPredicted RBP19.31■□□□□ 0.68
BRAF-201ENST00000288602 ARHGAP24Q8N264 748 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 EFHBQ8N7U6 833 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 ENDOVQ8N8Q3 282 aaKnown RBP19.31■□□□□ 0.68
BRAF-201ENST00000288602 KDM1BQ8NB78 822 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 ADAMTS19Q8TE59 1207 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 PTERQ96BW5 349 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 TRMT2BQ96GJ1 504 aaKnown RBP19.31■□□□□ 0.68
BRAF-201ENST00000288602 CATSPER2Q96P56 530 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 RAI2Q9Y5P3 530 aa19.31■□□□□ 0.68
BRAF-201ENST00000288602 A0A088AWK7 358 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 TEX28O15482 410 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 SKAP2O75563 359 aaPredicted RBP19.3■□□□□ 0.68
BRAF-201ENST00000288602 IPO13O94829 963 aaKnown RBP19.3■□□□□ 0.68
BRAF-201ENST00000288602 TMCC1O94876 653 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 KPNA2P52292 529 aaKnown RBP19.3■□□□□ 0.68
BRAF-201ENST00000288602 CUL3Q13618 768 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 RAB33AQ14088 237 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 NAA25Q14CX7 972 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 DNAL1Q4LDG9 190 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 ISCA2Q86U28 154 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 SCG3Q8WXD2 468 aaKnown RBP19.3■□□□□ 0.68
BRAF-201ENST00000288602 C1orf21Q9H246 121 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 CXorf56Q9H5V9 222 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 RPL26L1Q9UNX3 145 aaKnown RBP19.3■□□□□ 0.68
BRAF-201ENST00000288602 FCF1Q9Y324 198 aaKnown RBP19.3■□□□□ 0.68
BRAF-201ENST00000288602 F11P03951 625 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 COX4I1P13073 169 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 PTDSS1P48651 473 aaKnown RBP19.3■□□□□ 0.68
BRAF-201ENST00000288602 CYP4F8P98187 520 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 ACAP2Q15057 778 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms