RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CEACAM1P13688 526 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 ZFXP17010 805 aaPredicted RBP9.21□□□□□ -0.94
HMGN1-201ENST00000288344 TGM2P21980 687 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 LHCGRP22888 699 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 SERPINA4P29622 427 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 TRIM23P36406 574 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 CLDN2P57739 230 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 SKOR1P84550 965 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 DSC2Q02487 901 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 BCL2L1Q07817 233 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 LLGL1Q15334 1064 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 TEX44Q53QW1 395 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 PRAMEF14Q5SWL7 426 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 TIGD7Q6NT04 549 aaPredicted RBP9.21□□□□□ -0.94
HMGN1-201ENST00000288344 IL27RAQ6UWB1 636 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 B4GALNT4Q76KP1 1039 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 DPPA4Q7L190 304 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 TECPR1Q7Z6L1 1165 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 NLRP8Q86W28 1048 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 ZNF354CQ86Y25 554 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 PELI3Q8N2H9 469 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 SLC25A45Q8N413 288 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 RYBPQ8N488 228 aaPredicted RBP9.21□□□□□ -0.94
HMGN1-201ENST00000288344 DENND6BQ8NEG7 585 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 OR13H1Q8NG92 308 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 UBE2Q2Q8WVN8 375 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 EID2BQ96D98 161 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 IMP4Q96G21 291 aaKnown RBP9.21□□□□□ -0.94
HMGN1-201ENST00000288344 TEKT5Q96M29 485 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 COQ10AQ96MF6 247 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 LYSMD1Q96S90 227 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 ELF4Q99607 663 aaPredicted RBP9.21□□□□□ -0.94
HMGN1-201ENST00000288344 SEMA3CQ99985 751 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 GORASP1Q9BQQ3 440 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 FZD3Q9NPG1 666 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 LUC7LQ9NQ29 371 aaKnown RBP9.21□□□□□ -0.94
HMGN1-201ENST00000288344 DYRK4Q9NR20 520 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 TM7SF3Q9NS93 570 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 PHTF1Q9UMS5 762 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 BTBD3Q9Y2F9 522 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 GOLGA4Q13439 2230 aaKnown RBP9.21□□□□□ -0.94
HMGN1-201ENST00000288344 ZFHX4Q86UP3 3567 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 COL5A1P20908 1838 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-201ENST00000288344 ASXL3Q9C0F0 2248 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 SPTY2D1-AS1A0A0U1RR47 76 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 A0A1W2PQ67 120 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 TCRBV7S2A1N4TA0A589 114 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 MED19A0JLT2 244 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-201ENST00000288344 SH3BP5O60239 455 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 DFNA5O60443 496 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 PCDH8O95206 1070 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 PRKCGP05129 697 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 PTPN3P26045 913 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 IGFALSP35858 605 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 LIG3P49916 1009 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 POLR2LP62875 67 aaKnown RBP9.2□□□□□ -0.94
HMGN1-201ENST00000288344 SEMG2Q02383 582 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 PTSQ03393 145 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 KIF5AQ12840 1032 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 BNIP3Q12983 259 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 EIF2B5Q13144 721 aaKnown RBP9.2□□□□□ -0.94
HMGN1-201ENST00000288344 MSLNQ13421 630 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-201ENST00000288344 XRCC4Q13426 336 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 TFDP2Q14188 446 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 FZD2Q14332 565 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 STAT4Q14765 748 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 PDK1Q15118 436 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 NOMO1Q15155 1222 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 SLC14A2Q15849 920 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 KYAT3Q6YP21 454 aaKnown RBP9.2□□□□□ -0.94
HMGN1-201ENST00000288344 Q6ZSR6 202 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 SNX19Q92543 992 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 IFT43Q96FT9 208 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 KLHDC7BQ96G42 594 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 CAMK1GQ96NX5 476 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 WDR24Q96S15 920 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 TDRD1Q9BXT4 1180 aaKnown RBP9.2□□□□□ -0.94
HMGN1-201ENST00000288344 OSBPL8Q9BZF1 889 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 POLR1EQ9GZS1 481 aaKnown RBP9.2□□□□□ -0.94
HMGN1-201ENST00000288344 NT5MQ9NPB1 228 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 B4GALT6Q9UBX8 382 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 PCOLCE2Q9UKZ9 415 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 HEY1Q9Y5J3 304 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 RAI2Q9Y5P3 530 aa9.2□□□□□ -0.94
HMGN1-201ENST00000288344 ACACBO00763 2458 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 A0A0J9YYE9 177 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 A0A0U1RQS6 177 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 LOC285095A0A1B0GVY8 99 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 FAM221BA6H8Z2 402 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 NPIPB15A6NHN6 443 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 APOC4-APOC2K7ER74 178 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 OPHN1O60890 802 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 TM7SF2O76062 418 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 HEXIM1O94992 359 aaKnown RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 SOD1P00441 154 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 TRBC1P01850 177 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 APOC2P02655 101 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 FUCA1P04066 466 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 HOXC4P09017 264 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 C6P13671 934 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms