RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ADRM1Q16186 407 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 SCIMPQ6UWF3 145 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 LRRN4CLQ8ND94 238 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 HEPHQ9BQS7 1158 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 SLC25A51Q9H1U9 297 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 PCDH12Q9NPG4 1184 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 INTS7Q9NVH2 962 aaKnown RBP18.57■□□□□ 0.56
PCDH1-201ENST00000287008 RAP2CQ9Y3L5 183 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 HSMCR30P0CW71 290 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 SLC9A5Q14940 896 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 MACC1Q6ZN28 852 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 ZDHHC13Q8IUH4 622 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 FAM20CQ8IXL6 584 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 PWWP2AQ96N64 755 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 RSPH9Q9H1X1 276 aaPredicted RBP18.56■□□□□ 0.56
PCDH1-201ENST00000287008 REEP1Q9H902 201 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 LEF1Q9UJU2 399 aaPredicted RBP18.56■□□□□ 0.56
PCDH1-201ENST00000287008 ZFP37Q9Y6Q3 630 aaPredicted RBP18.56■□□□□ 0.56
PCDH1-201ENST00000287008 A0A0U1RQF3 1178 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 AZIN1O14977 448 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 HNRNPDQ14103 355 aaKnown RBP18.56■□□□□ 0.56
PCDH1-201ENST00000287008 OLFML2BQ68BL8 750 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 C16orf62Q7Z3J2 963 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 ANKS1BQ7Z6G8 1248 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 CKAP2Q8WWK9 683 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 SPATA5L1Q9BVQ7 753 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 EPB41L4BQ9H329 900 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 SAR1AQ9NR31 198 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 CAB39Q9Y376 341 aaPredicted RBP18.56■□□□□ 0.56
PCDH1-201ENST00000287008 MAGEA13PA6NCF6 341 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 MRPS15P82914 257 aaKnown RBP18.56■□□□□ 0.56
PCDH1-201ENST00000287008 ZFP1Q6P2D0 407 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 CHSY3Q70JA7 882 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 R3HCC1LQ7Z5L2 792 aaKnown RBP18.56■□□□□ 0.56
PCDH1-201ENST00000287008 GPR141Q7Z602 305 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 PCDH20Q8N6Y1 951 aaKnown RBP18.56■□□□□ 0.56
PCDH1-201ENST00000287008 NPLOC4Q8TAT6 608 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 STYXQ8WUJ0 223 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 GLMNQ92990 594 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 TRMOQ9BU70 441 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 TNKS2Q9H2K2 1166 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 ZNF711Q9Y462 761 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 PCDHGC4Q9Y5F7 938 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 MYO5BQ9ULV0 1848 aa18.56■□□□□ 0.56
PCDH1-201ENST00000287008 TPSB2P20231 275 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 TPSAB1Q15661 275 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 SNAP47Q5SQN1 464 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 LIPMQ5VYY2 423 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 CNKSR3Q6P9H4 555 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 DEPDC7Q96QD5 511 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 PBX1P40424 430 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 CDH13P55290 713 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 DSC2Q02487 901 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 SF1Q15637 639 aaKnown RBP18.55■□□□□ 0.56
PCDH1-201ENST00000287008 TNS4Q8IZW8 715 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 PTCD2Q8WV60 388 aaKnown RBP18.55■□□□□ 0.56
PCDH1-201ENST00000287008 NKD2Q969F2 451 aaPredicted RBP18.55■□□□□ 0.56
PCDH1-201ENST00000287008 FANCEQ9HB96 536 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 PDP2Q9P2J9 529 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 FMN2Q9NZ56 1722 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 YJEFN3A6XGL0 299 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 E7ENQ6 273 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 SHBGP04278 402 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 SYN1P17600 705 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 SSR2P43308 183 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 CMC1Q7Z7K0 106 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 RTL3Q8N8U3 475 aaKnown RBP18.55■□□□□ 0.56
PCDH1-201ENST00000287008 COL14A1Q05707 1796 aaKnown RBP18.55■□□□□ 0.56
PCDH1-201ENST00000287008 PIPSLA2A3N6 862 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 PDE5AO76074 875 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 NR2F1P10589 423 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 TNFRSF8P28908 595 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 PCYT1AP49585 367 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 SPATA6LQ8N4H0 392 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 SETD9Q8NE22 299 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 EXO5Q9H790 373 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 APOBEC3GQ9HC16 384 aaKnown RBP18.55■□□□□ 0.56
PCDH1-201ENST00000287008 POLMQ9NP87 494 aaPredicted RBP18.55■□□□□ 0.56
PCDH1-201ENST00000287008 ZSCAN32Q9NX65 697 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 BTRCQ9Y297 605 aa18.55■□□□□ 0.56
PCDH1-201ENST00000287008 CBX6O95503 412 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 KRT75O95678 551 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 C2P06681 752 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 SNRPB2P08579 225 aaKnown RBP18.54■□□□□ 0.56
PCDH1-201ENST00000287008 GSSP48637 474 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 GRSF1Q12849 480 aaKnown RBP eCLIP18.54■□□□□ 0.56
PCDH1-201ENST00000287008 GRB14Q14449 540 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 GALNT13Q8IUC8 556 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 APOL4Q9BPW4 351 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 TTLL2Q9BWV7 592 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 BCLAF3A2AJT9 711 aaKnown RBP18.54■□□□□ 0.56
PCDH1-201ENST00000287008 CLOCKO15516 846 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 CCNDBP1O95273 360 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 PIK3R1P27986 724 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 HGSNATQ68CP4 663 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 FGD2Q7Z6J4 655 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 DNAJB7Q7Z6W7 309 aaPredicted RBP18.54■□□□□ 0.56
PCDH1-201ENST00000287008 ADI1Q9BV57 179 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 ZDHHC4Q9NPG8 344 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 CDKN2BP42772 138 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms