RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 NYNRINQ9P2P1 1898 aaKnown RBP10.42□□□□□ -0.74
SKA1-201ENST00000285116 E2F8A0AVK6 867 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 TRIM64BA6NI03 449 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 BBIP1A8MTZ0 92 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 MYL3P08590 195 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 C7P10643 843 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 BMP2P12643 396 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 LHX1P48742 406 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 GEMP55040 296 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 ADAM17P78536 824 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 AFMIDQ63HM1 303 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 OGFOD2Q6N063 350 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 SLC41A1Q8IVJ1 513 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 CEP97Q8IW35 865 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 SCAIQ8N9R8 606 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 ADAM32Q8TC27 787 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 ZUFSPQ96AP4 578 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 PBXIP1Q96AQ6 731 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 ROPN1LQ96C74 230 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 SCYL1Q96KG9 808 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 PPP1R36Q96LQ0 422 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 PGLYRP2Q96PD5 576 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 NPAS2Q99743 824 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 RHOBTB2Q9BYZ6 727 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 GID8Q9NWU2 228 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 WDR87Q6ZQQ6 2873 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 HEATR9A2RTY3 570 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 YJEFN3A6XGL0 299 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 PHGDHO43175 533 aaKnown RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 AKAP10O43572 662 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 SULT1C4O75897 302 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 SNAI1O95863 264 aaPredicted RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 MYF6P23409 242 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 RXRGP48443 463 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 PRAMEP78395 509 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 NFKB2Q00653 900 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 RGS21Q2M5E4 152 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 SAMD4BQ5PRF9 694 aaKnown RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 TMEM198Q66K66 360 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 NXNQ6DKJ4 435 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 SLC22A9Q8IVM8 553 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 MFSD2AQ8NA29 543 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 TRUB1Q8WWH5 349 aaKnown RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 SLCO4A1Q96BD0 722 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 SMOQ99835 787 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 SLC25A23Q9BV35 468 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 NOL11Q9H8H0 719 aaKnown RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 ARNT2Q9HBZ2 717 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 SPAG4Q9NPE6 437 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 TRNAU1APQ9NX07 287 aaKnown RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 KIAA1522Q9P206 1035 aaPredicted RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 OR12D3Q9UGF7 316 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 GINS2Q9Y248 185 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 B3GNT3Q9Y2A9 372 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 A0A1W2PPW3 197 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 PDHXO00330 501 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 FGF10O15520 208 aaPredicted RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 SNAP91O60641 907 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 CCR10P46092 362 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 MRPL19P49406 292 aaKnown RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 CLCN5P51795 746 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 NME5P56597 212 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 NRG1Q02297 640 aaPredicted RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 ARTNQ5T4W7 220 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 MANEALQ5VSG8 457 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 REP15Q6BDI9 236 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 HMBOX1Q6NT76 420 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 XKR5Q6UX68 686 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 FAM35AQ86V20 835 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 NETO2Q8NC67 525 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 GABPB2Q8TAK5 448 aaPredicted RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 BRI3BPQ8WY22 251 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 NXNL1Q96CM4 212 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 L3HYPDHQ96EM0 354 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 TCF12Q99081 682 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 TDRD1Q9BXT4 1180 aaKnown RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 PCDHAC1Q9H158 963 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 GLOD4Q9HC38 313 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 ATP13A1Q9HD20 1204 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 CRTAC1Q9NQ79 661 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 OSER1Q9NX31 292 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 TMEM9Q9P0T7 183 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 CNOT6Q9ULM6 557 aaKnown RBP10.41□□□□□ -0.74
SKA1-201ENST00000285116 SLC30A1Q9Y6M5 507 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 MIA3Q5JRA6 1907 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 MYO15AQ9UKN7 3530 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 NLRC5Q86WI3 1866 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 MYO9BQ13459 2157 aa10.41□□□□□ -0.74
SKA1-201ENST00000285116 IQCA1LA6NCM1 817 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 LRIG2O94898 1065 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 PAPSS2O95340 614 aaPredicted RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 F2P00734 622 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 JCHAINP01591 159 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 RBP1P09455 135 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 ADCYAP1R1P41586 468 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 ATP1A4Q13733 1029 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 AARS2Q5JTZ9 985 aaKnown RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 KIAA0319Q5VV43 1072 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 GPR107Q5VW38 600 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 IQSEC1Q6DN90 963 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms