RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PCDHB9Q9Y5E1 797 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 SEC23IPQ9Y6Y8 1000 aaKnown RBP18■□□□□ 0.47
CAPN1-201ENST00000279247 POU4F1Q01851 419 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 SPDYAQ5MJ70 313 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 CCDC117Q8IWD4 279 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-201ENST00000279247 BRSK1Q8TDC3 778 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 MICAL1Q8TDZ2 1067 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 ADAMTS19Q8TE59 1207 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 STYXQ8WUJ0 223 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 MRPS31Q92665 395 aaKnown RBP17.99■□□□□ 0.47
CAPN1-201ENST00000279247 GPR78Q96P69 363 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 OR52B2Q96RD2 323 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 MRPL46Q9H2W6 279 aaKnown RBP17.99■□□□□ 0.47
CAPN1-201ENST00000279247 RC3H2Q9HBD1 1191 aaKnown RBP17.99■□□□□ 0.47
CAPN1-201ENST00000279247 IL21Q9HBE4 155 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 ZDHHC2Q9UIJ5 367 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 ANKRD36A6QL64 1941 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 COL4A6Q14031 1691 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 TYW5A2RUC4 315 aaKnown RBP17.99■□□□□ 0.47
CAPN1-201ENST00000279247 SLC7A4O43246 635 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 SKAP2O75563 359 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-201ENST00000279247 JUNP05412 331 aaKnown RBP17.99■□□□□ 0.47
CAPN1-201ENST00000279247 C8AP07357 584 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 LEPRP48357 1165 aaKnown RBP17.99■□□□□ 0.47
CAPN1-201ENST00000279247 PLPP4Q5VZY2 271 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 TMEM207Q6UWW9 146 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 TCEAL8Q8IYN2 117 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 TEX9Q8N6V9 391 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 OR4L1Q8NH43 312 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 CDKN2AIPNLQ96HQ2 116 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 CDH19Q9H159 772 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 MFSD1Q9H3U5 465 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 TMEM51Q9NW97 253 aa17.99■□□□□ 0.47
CAPN1-201ENST00000279247 SIN3BO75182 1162 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 ARSAP15289 507 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 CD1EP15812 388 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 FMO4P31512 558 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 TRAF2Q12933 501 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 FAM83EQ2M2I3 478 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 PHTF2Q8N3S3 785 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 TMEM199Q8N511 208 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 RBM15BQ8NDT2 890 aaKnown RBP17.98■□□□□ 0.47
CAPN1-201ENST00000279247 FEM1AQ9BSK4 669 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 TLR9Q9NR96 1032 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 CATSPERZQ9NTU4 200 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 VPS51Q9UID3 782 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 SH3BP1Q9Y3L3 701 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 LCHNA4D1U4 455 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 PRLP01236 227 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 SERPINA6P08185 405 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 GM2AP17900 193 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 TFEBP19484 476 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 TNKS2Q9H2K2 1166 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 DENND2DQ9H6A0 471 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-201ENST00000279247 IGSF5Q9NSI5 407 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-201ENST00000279247 GSC2O15499 205 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 SMAD6O43541 496 aaKnown RBP17.98■□□□□ 0.47
CAPN1-201ENST00000279247 RFPL2O75678 378 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 RPP40O75818 363 aaKnown RBP17.98■□□□□ 0.47
CAPN1-201ENST00000279247 CD160O95971 181 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 ALPIP09923 528 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 CLCN5P51795 746 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 TUBB3Q13509 450 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 C5orf22Q49AR2 442 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 CMTR2Q8IYT2 770 aaKnown RBP17.98■□□□□ 0.47
CAPN1-201ENST00000279247 FIBCD1Q8N539 461 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 GABPB2Q8TAK5 448 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-201ENST00000279247 FATE1Q969F0 183 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 TADA1Q96BN2 335 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 TRMT2BQ96GJ1 504 aaKnown RBP17.98■□□□□ 0.47
CAPN1-201ENST00000279247 ZNF599Q96NL3 588 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 RANBP9Q96S59 729 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 TDRD1Q9BXT4 1180 aaKnown RBP17.98■□□□□ 0.47
CAPN1-201ENST00000279247 FKBPLQ9UIM3 349 aa17.98■□□□□ 0.47
CAPN1-201ENST00000279247 HIDE1A8MVS5 230 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 ZBTB14O43829 449 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 SESN3P58005 492 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 ACBD5Q5T8D3 534 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-201ENST00000279247 ZNF697Q5TEC3 545 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 TMEM198Q66K66 360 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 MRNIPQ6NTE8 343 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 ZNF549Q6P9A3 640 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 KIAA0408Q6ZU52 694 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 SETD3Q86TU7 594 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-201ENST00000279247 CAMK1DQ8IU85 385 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 EFCAB3Q8N7B9 438 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 FAM161BQ96MY7 647 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 THTPAQ9BU02 230 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 CCDC106Q9BWC9 280 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 SARS2Q9NP81 518 aaKnown RBP17.97■□□□□ 0.47
CAPN1-201ENST00000279247 MID2Q9UJV3 735 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 TBC1D30Q9Y2I9 924 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 CAPN14A8MX76 684 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 KIAA0355O15063 1070 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 PAPSS2O95340 614 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-201ENST00000279247 PRAMEF12O95522 483 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 APOA4P06727 396 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 SERPINB5P36952 375 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 KCNC1P48547 511 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms