RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KPNA7A9QM74 516 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 TMEM233B4DJY2 109 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 FAM86B1E9PN63 330 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 F2RL2O00254 374 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 PEX12O00623 359 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 ANGPT2O15123 496 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 CD3EAPO15446 510 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 RNF113AO15541 343 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 NMT2O60551 498 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 DAB1O75553 588 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 RASSF9O75901 435 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 SIX3O95343 332 aaPredicted RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 LY86O95711 162 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 ABCB1P08183 1280 aaPredicted RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 ACTN1P12814 892 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 GYPEP15421 78 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 MST1P26927 711 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 AVPR2P30518 371 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 IDUAP35475 653 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 CCR10P46092 362 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 KCNJ4P48050 445 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 DHPSP49366 369 aaPredicted RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 MRPL12P52815 198 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 PER3P56645 1201 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 PRAMEP78395 509 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 CD69Q07108 199 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 TBL3Q12788 808 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 CHIT1Q13231 466 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 TUBB3Q13509 450 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 SNTB1Q13884 538 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 STK11Q15831 433 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 HYAL4Q2M3T9 481 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 KCNT1Q5JUK3 1230 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 SPDYAQ5MJ70 313 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 DNTTIP2Q5QJE6 756 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 STRIP1Q5VSL9 837 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 DCAF12L1Q5VU92 463 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 CST9LP1Q5W188 147 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 ETFRF1Q6IPR1 90 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 TMEM270Q6UE05 265 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 INTS8Q75QN2 995 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 ERN2Q76MJ5 926 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 TAS1R1Q7RTX1 841 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 MIER3Q7Z3K6 550 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 CDH26Q8IXH8 852 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 PALM2Q8IXS6 379 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 SFRP1Q8N474 314 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 DNERQ8NFT8 737 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 C17orf50Q8WW18 174 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 POMGNT1Q8WZA1 660 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 MIEF2Q96C03 454 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 DCPSQ96C86 337 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 SPACA9Q96E40 222 aaPredicted RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 DTNBP1Q96EV8 351 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 CFAP57Q96MR6 1250 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 HEMGNQ9BXL5 484 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 MTMR12Q9C0I1 747 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 EHD1Q9H4M9 534 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 INTS13Q9NVM9 706 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 BEX4Q9NWD9 120 aaPredicted RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 PSD3Q9NYI0 1048 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 KCND2Q9NZV8 630 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 SEC63Q9UGP8 760 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 FBXO40Q9UH90 709 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 LEF1Q9UJU2 399 aaPredicted RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 OSGIN1Q9UJX0 560 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 PRDM4Q9UKN5 801 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 CNTN6Q9UQ52 1028 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 TSC22D4Q9Y3Q8 395 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 NFS1Q9Y697 457 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 GOLGB1Q14789 3259 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 SBF1O95248 1867 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 UTYO14607 1347 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 WDR19Q8NEZ3 1342 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 MYO3BQ8WXR4 1341 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 MED23Q9ULK4 1368 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 A0A087WWL8 130 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 TRBC2A0A5B9 178 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 OR2W5A6NFC9 320 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 GAGE10A6NGK3 116 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SLC9B1P1A6NJY1 282 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 H0YIV9 168 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 CTDSP2O14595 271 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SPAG6O75602 509 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SEC14L2O76054 403 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SEC24DO94855 1032 aaPredicted RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 CELF2O95319 508 aaKnown RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 IPO7O95373 1038 aaKnown RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 ONECUT2O95948 504 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 PLGP00747 810 aaPredicted RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 FYNP06241 537 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 CYP21A2P08686 494 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 CSF2RAP15509 400 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ZNF20P17024 532 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 MCM3P25205 808 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 RDXP35241 583 aaKnown RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 MAP2K2P36507 400 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 HSD17B2P37059 387 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ARL1P40616 181 aaPredicted RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 GCLCP48506 637 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms