RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 HNF1BP35680 557 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 DSC2Q02487 901 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 CNGA3Q16281 694 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 RALGPS1Q5JS13 557 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 CDCP2Q5VXM1 449 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 SLC9A4Q6AI14 798 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.47□□□□□ -0.09
HMGN3-201ENST00000275036 PIH1D2Q8WWB5 315 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 FATE1Q969F0 183 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 MRFAP1L1Q96HT8 127 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 COQ10AQ96MF6 247 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 GOLPH3Q9H4A6 298 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 RBM22Q9NW64 420 aaKnown RBP eCLIP14.47□□□□□ -0.09
HMGN3-201ENST00000275036 APOBEC3BQ9UH17 382 aaKnown RBP14.47□□□□□ -0.09
HMGN3-201ENST00000275036 PCDHB1Q9Y5F3 818 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 CSNK1G3Q9Y6M4 447 aa14.47□□□□□ -0.09
HMGN3-201ENST00000275036 NEMP2A6NFY4 417 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 NPIPB15A6NHN6 443 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-201ENST00000275036 ZNF487B1APH4 448 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 TLX3O43711 291 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-201ENST00000275036 FZD6O60353 706 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 MT-CO3P00414 261 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 KRT1P04264 644 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 ALPPL2P10696 532 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 TNNT1P13805 278 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 CCNB1P14635 433 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 VIPR1P32241 457 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 MAGEA1P43355 309 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 PEX5P50542 639 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 HADHBP55084 474 aaKnown RBP14.46□□□□□ -0.09
HMGN3-201ENST00000275036 ITKQ08881 620 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 NIPAL4Q0D2K0 466 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 MTM1Q13496 603 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 NFATC4Q14934 902 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 TCEA2Q15560 299 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 CDKN3Q16667 212 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 ALG11Q2TAA5 492 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 PRRT3Q5FWE3 981 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 LRRC38Q5VT99 294 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 TIGD7Q6NT04 549 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-201ENST00000275036 ZCCHC8Q6NZY4 707 aaKnown RBP14.46□□□□□ -0.09
HMGN3-201ENST00000275036 GUSBP11Q6P575 273 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 NPNTQ6UXI9 565 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 TSPAN33Q86UF1 283 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 VSIG1Q86XK7 387 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 CBARPQ8N350 705 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-201ENST00000275036 ARRDC2Q8TBH0 407 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 BTN2A2Q8WVV5 523 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 TSACCQ96A04 125 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-201ENST00000275036 RNF25Q96BH1 459 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-201ENST00000275036 HDAC11Q96DB2 347 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 MCCC1Q96RQ3 725 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-201ENST00000275036 LGMNQ99538 433 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 POLR1EQ9GZS1 481 aaKnown RBP14.46□□□□□ -0.09
HMGN3-201ENST00000275036 PHTF1Q9UMS5 762 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 LHX6Q9UPM6 363 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 CLCA2Q9UQC9 943 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 PPIL1Q9Y3C6 166 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 RAI2Q9Y5P3 530 aa14.46□□□□□ -0.09
HMGN3-201ENST00000275036 UNC13CQ8NB66 2214 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 A0A1W2PQ67 120 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 SOWAHDA6NJG2 315 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 LOC400499M0QZD8 3231 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 KCNK1O00180 336 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 OPA1O60313 960 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 HEXIM1O94992 359 aaKnown RBP14.45□□□□□ -0.1
HMGN3-201ENST00000275036 ALPIP09923 528 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 HOXB3P14651 431 aaPredicted RBP14.45□□□□□ -0.1
HMGN3-201ENST00000275036 TSHRP16473 764 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 CTPS1P17812 591 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 MX2P20592 715 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 FECHP22830 423 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 SLC1A1P43005 524 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 PPARDQ03181 441 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 PPIDQ08752 370 aaKnown RBP14.45□□□□□ -0.1
HMGN3-201ENST00000275036 ZBTB17Q13105 803 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 RTP5Q14D33 572 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 ACOX1Q15067 660 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 COL28A1Q2UY09 1125 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 HS1BP3Q53T59 392 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 PERM1Q5SV97 790 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 ARMC12Q5T9G4 340 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 FAXCQ5TGI0 409 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 DENND2CQ68D51 928 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 ENPP7Q6UWV6 458 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 MFSD7Q6UXD7 560 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 HSD11B1LQ7Z5J1 315 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 RHOT1Q8IXI2 618 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 CCDC13Q8IYE1 715 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 CACTIN-AS1Q8N1I8 211 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 IFI44Q8TCB0 444 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 HNRNPLLQ8WVV9 542 aaKnown RBP14.45□□□□□ -0.1
HMGN3-201ENST00000275036 NXPE2Q96DL1 559 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 SCRN2Q96FV2 425 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 PDXPQ96GD0 296 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 CRELD1Q96HD1 420 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 TBATAQ96M53 351 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 SMG1Q96Q15 3661 aaKnown RBP14.45□□□□□ -0.1
HMGN3-201ENST00000275036 DUSP23Q9BVJ7 150 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 BOCQ9BWV1 1114 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms