RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TTBK2Q6IQ55 1244 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 PIAS4Q8N2W9 510 aaPredicted RBP9.25□□□□□ -0.93
PDGFC-201ENST00000274071 AGR3Q8TD06 166 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 DEDD2Q8WXF8 326 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 TBATAQ96M53 351 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 BDH2Q9BUT1 245 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 NECTIN3Q9NQS3 549 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 SNX15Q9NRS6 342 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 EVA1BQ9NVM1 165 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 SAE1Q9UBE0 346 aaPredicted RBP9.25□□□□□ -0.93
PDGFC-201ENST00000274071 MRPS7Q9Y2R9 242 aaKnown RBP9.25□□□□□ -0.93
PDGFC-201ENST00000274071 COMMD10Q9Y6G5 202 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 DLEC1Q9Y238 1755 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 TANC1Q9C0D5 1861 aa9.25□□□□□ -0.93
PDGFC-201ENST00000274071 MAST2Q6P0Q8 1798 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 KLRG2A4D1S0 409 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 C6orf229H3BNL8 230 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 NEMP1O14524 444 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 TPST1O60507 370 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 HOXD4P09016 255 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 C7P10643 843 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 IL1R1P14778 569 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ADCY7P51828 1080 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 MCCD1P59942 119 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 KRR1Q13601 381 aaKnown RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 C12orf60Q5U649 245 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 TMEM198Q66K66 360 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 RSBN1LQ6PCB5 846 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ZNF767PQ75MW2 155 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 STRADAQ7RTN6 431 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 PRSS42Q7Z5A4 293 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 SPRED1Q7Z699 444 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 FAM9CQ8IZT9 166 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 SLC7A14Q8TBB6 771 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 MAGEE2Q8TD90 523 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ST8SIA2Q92186 375 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 APBB2Q92870 758 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 NT5C1BQ96P26 610 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 SEC22CQ9BRL7 303 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 PNPLA8Q9NP80 782 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 NGRNQ9NPE2 291 aaKnown RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 AGPAT4Q9NRZ5 378 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 TAS2R9Q9NYW1 312 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ZNRF3Q9ULT6 936 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 MAGED2Q9UNF1 606 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 AURKCQ9UQB9 309 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 LRRC72A6NJI9 287 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 TRIM24O15164 1050 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 PLIN3O60664 434 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ADAM11O75078 769 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ITGB3P05106 788 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 S100A6P06703 90 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 HMGB2P26583 209 aaKnown RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 GGT5P36269 586 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 CYP2J2P51589 502 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 PPP4CP60510 307 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 SKIV2LQ15477 1246 aaKnown RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 RAP1GAP2Q684P5 730 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 SLFN12Q8IYM2 578 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 PM20D2Q8IYS1 436 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 TAGAPQ8N103 731 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 OR8K3Q8NH51 312 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 SPATA18Q8TC71 538 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ZFAND1Q8TCF1 268 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 SLITRK1Q96PX8 696 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 PHOX2BQ99453 314 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 SLC6A17Q9H1V8 727 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 CCM2LQ9NUG4 571 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 POLR3BQ9NW08 1133 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 B3GNT2Q9NY97 397 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 CYB5R1Q9UHQ9 305 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ADGRE2Q9UHX3 823 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 CDY2AQ9Y6F7 541 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 CDY1Q9Y6F8 540 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 HMX3A6NHT5 357 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 AGAP5A6NIR3 686 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ZBTB5O15062 677 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 AKR7A2O43488 359 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 MED24O75448 989 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 DNAJB5O75953 348 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 APBA3O96018 575 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 IFNA14P01570 189 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 APOA1P02647 267 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 CSH1P0DML2 217 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 CSH2P0DML3 217 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 CYP2C8P10632 490 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ALOX12P18054 663 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 GRK3P35626 688 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 NCS1P62166 190 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 NKX3-2P78367 333 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 GPR50Q13585 617 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 PLEKHG6Q3KR16 790 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 HABP4Q5JVS0 413 aaKnown RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 TBCELQ5QJ74 424 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ARHGEF16Q5VV41 709 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 TXNDC11Q6PKC3 985 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 POTEGQ6S5H5 508 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 DDIASQ8IXT1 998 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 SYTL1Q8IYJ3 562 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 CMTR2Q8IYT2 770 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms