RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 TBC1D13Q9NVG8 400 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 CMTM6Q9NX76 183 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 SLC27A5Q9Y2P5 690 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 FER1L6Q2WGJ9 1857 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 C19orf81C9J6K1 198 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 CFAP99D6REC4 459 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 NFKBIEO00221 500 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 ARPC2O15144 300 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 CYP2C8P10632 490 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 NFATC3Q12968 1075 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 INPP5AQ14642 412 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 IMPG1Q17R60 797 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 SLC36A3Q495N2 470 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 PYCR3Q53H96 274 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 PDZD4Q76G19 769 aaPredicted RBP12.95□□□□□ -0.34
COL8A1-202ENST00000273342 CATSPER4Q7RTX7 472 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 GPRIN1Q7Z2K8 1008 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 TMCO5AQ8N6Q1 288 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 APPL2Q8NEU8 664 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 TNIP2Q8NFZ5 429 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 NUDT8Q8WV74 236 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 TUBGCP3Q96CW5 907 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 RNF145Q96MT1 663 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 FSD1LQ9BXM9 530 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 ING2Q9H160 280 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 IGSF5Q9NSI5 407 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 ERAP1Q9NZ08 941 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 IFT80Q9P2H3 777 aaPredicted RBP12.95□□□□□ -0.34
COL8A1-202ENST00000273342 SIP14410 1827 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 H0YJX3 145 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 NPHS1O60500 1241 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 RECQL4O94761 1208 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 LRIG2O94898 1065 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 FYNP06241 537 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 CCNA2P20248 432 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 DIO3P55073 304 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 LSM3P62310 102 aaKnown RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 LBX2Q6XYB7 198 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 OSTM1Q86WC4 334 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 PCYOX1LQ8NBM8 494 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 BEST2Q8NFU1 509 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 PPP1R14BQ96C90 147 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 C19orf60Q96EN9 201 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 MPHOSPH6Q99547 160 aaKnown RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 TBL1YQ9BQ87 522 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 BRD8Q9H0E9 1235 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 MEAF6Q9HAF1 191 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 AGPAT4Q9NRZ5 378 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 EXD2Q9NVH0 621 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 GTF2IRD1Q9UHL9 959 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 NUDT5Q9UKK9 219 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 TTC36A6NLP5 189 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 SOCS7O14512 581 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 XYLBO75191 536 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 RSL1D1O76021 490 aaKnown RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 BCL10O95999 233 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 IL7RP16871 459 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 EDNRBP24530 442 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 FRG1Q14331 258 aaKnown RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 TRIM16LQ309B1 348 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 PCID2Q5JVF3 399 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 NEPROQ6NW34 567 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 ERO1BQ86YB8 467 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 AFAP1L2Q8N4X5 818 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 B3GALNT2Q8NCR0 500 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 DQX1Q8TE96 717 aaKnown RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 EML4Q9HC35 981 aaKnown RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 MID1IP1Q9NPA3 183 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 A8MU76 341 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 FAM155AB1AL88 458 aaPredicted RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 PIP5K1BO14986 540 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 ALDH4A1P30038 563 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 ACADSBP45954 432 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 OXCT1P55809 520 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 ITKQ08881 620 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 UGP2Q16851 508 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 RALGPS2Q86X27 583 aaPredicted RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 TTC39CQ8N584 583 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 SEPT8Q92599 483 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 CENPNQ96H22 339 aaPredicted RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 GLT1D1Q96MS3 346 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 OSMRQ99650 979 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 KIFC1Q9BW19 673 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 WDCPQ9H6R7 721 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 RCOR3Q9P2K3 495 aaPredicted RBP12.94□□□□□ -0.34
COL8A1-202ENST00000273342 DAPK2Q9UIK4 370 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 TIMM22Q9Y584 194 aa12.94□□□□□ -0.34
COL8A1-202ENST00000273342 A0A1B0GTL3 188 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 TMEM247A6NEH6 219 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 ACOX3O15254 700 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 SYNCRIPO60506 623 aaKnown RBP12.93□□□□□ -0.34
COL8A1-202ENST00000273342 RPS9P46781 194 aaKnown RBP12.93□□□□□ -0.34
COL8A1-202ENST00000273342 CCT8P50990 548 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 IST1P53990 364 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 MAXP61244 160 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 SH3BP2P78314 561 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 SOX4Q06945 474 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-202ENST00000273342 RGS21Q2M5E4 152 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms