RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 UNC13CQ8NB66 2214 aa9□□□□□ -0.97
TPM3-201ENST00000271850 LGALS16A8MUM7 142 aa9□□□□□ -0.97
TPM3-201ENST00000271850 AGRPO00253 132 aa9□□□□□ -0.97
TPM3-201ENST00000271850 TOR1BO14657 336 aa9□□□□□ -0.97
TPM3-201ENST00000271850 PLD2O14939 933 aa9□□□□□ -0.97
TPM3-201ENST00000271850 PEX11BO96011 259 aa9□□□□□ -0.97
TPM3-201ENST00000271850 RPLP0P05388 317 aaKnown RBP9□□□□□ -0.97
TPM3-201ENST00000271850 CALB1P05937 261 aa9□□□□□ -0.97
TPM3-201ENST00000271850 TCF4P15884 667 aa9□□□□□ -0.97
TPM3-201ENST00000271850 ITIH1P19827 911 aa9□□□□□ -0.97
TPM3-201ENST00000271850 RBMS1P29558 406 aaKnown RBP9□□□□□ -0.97
TPM3-201ENST00000271850 SLC5A2P31639 672 aa9□□□□□ -0.97
TPM3-201ENST00000271850 UGT1A5P35504 534 aa9□□□□□ -0.97
TPM3-201ENST00000271850 PAPOLAP51003 745 aaKnown RBP9□□□□□ -0.97
TPM3-201ENST00000271850 ARSDP51689 593 aa9□□□□□ -0.97
TPM3-201ENST00000271850 ZFP36L1Q07352 338 aaKnown RBP9□□□□□ -0.97
TPM3-201ENST00000271850 SPIDRQ14159 915 aa9□□□□□ -0.97
TPM3-201ENST00000271850 HLTFQ14527 1009 aaKnown RBP eCLIP9□□□□□ -0.97
TPM3-201ENST00000271850 PARP15Q460N3 678 aa9□□□□□ -0.97
TPM3-201ENST00000271850 CT47A1Q5JQC4 288 aaPredicted RBP9□□□□□ -0.97
TPM3-201ENST00000271850 EFHC2Q5JST6 749 aa9□□□□□ -0.97
TPM3-201ENST00000271850 BROXQ5VW32 411 aa9□□□□□ -0.97
TPM3-201ENST00000271850 DNAJC24Q6P3W2 148 aa9□□□□□ -0.97
TPM3-201ENST00000271850 SCYL2Q6P3W7 929 aa9□□□□□ -0.97
TPM3-201ENST00000271850 OGFOD3Q6PK18 319 aa9□□□□□ -0.97
TPM3-201ENST00000271850 LIPIQ6XZB0 460 aa9□□□□□ -0.97
TPM3-201ENST00000271850 RD3Q7Z3Z2 195 aa9□□□□□ -0.97
TPM3-201ENST00000271850 IRF2BP2Q7Z5L9 587 aa9□□□□□ -0.97
TPM3-201ENST00000271850 ZNF354CQ86Y25 554 aa9□□□□□ -0.97
TPM3-201ENST00000271850 NRROSQ86YC3 692 aa9□□□□□ -0.97
TPM3-201ENST00000271850 SLITRK4Q8IW52 837 aa9□□□□□ -0.97
TPM3-201ENST00000271850 FSTL5Q8N475 847 aaPredicted RBP9□□□□□ -0.97
TPM3-201ENST00000271850 TPCN2Q8NHX9 752 aa9□□□□□ -0.97
TPM3-201ENST00000271850 HCAR2Q8TDS4 363 aa9□□□□□ -0.97
TPM3-201ENST00000271850 PMEPA1Q969W9 287 aa9□□□□□ -0.97
TPM3-201ENST00000271850 GRAMD1AQ96CP6 724 aa9□□□□□ -0.97
TPM3-201ENST00000271850 AGPAT1Q99943 283 aa9□□□□□ -0.97
TPM3-201ENST00000271850 SNRNP25Q9BV90 132 aaKnown RBP9□□□□□ -0.97
TPM3-201ENST00000271850 TMEM168Q9H0V1 697 aa9□□□□□ -0.97
TPM3-201ENST00000271850 CHMP5Q9NZZ3 219 aa9□□□□□ -0.97
TPM3-201ENST00000271850 FOXJ2Q9P0K8 574 aa9□□□□□ -0.97
TPM3-201ENST00000271850 ACSL6Q9UKU0 697 aa9□□□□□ -0.97
TPM3-201ENST00000271850 GPR34Q9UPC5 381 aa9□□□□□ -0.97
TPM3-201ENST00000271850 ATP8A1Q9Y2Q0 1164 aa9□□□□□ -0.97
TPM3-201ENST00000271850 DAAM1Q9Y4D1 1078 aa9□□□□□ -0.97
TPM3-201ENST00000271850 DGKBQ9Y6T7 804 aa9□□□□□ -0.97
TPM3-201ENST00000271850 RNF215Q9Y6U7 377 aa9□□□□□ -0.97
TPM3-201ENST00000271850 UBR5O95071 2799 aaPredicted RBP8.99□□□□□ -0.97
TPM3-201ENST00000271850 A0A0U1RQS6 177 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 LRRC10BA6NIK2 292 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 C9orf172C9J069 976 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 RECQL5O94762 991 aaPredicted RBP8.99□□□□□ -0.97
TPM3-201ENST00000271850 RASGRP1O95267 797 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 ATP1A3P13637 1013 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 CCKBRP32239 447 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 TRIM23P36406 574 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 KIAA1024LP59773 190 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 B4GALNT1Q00973 533 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 ELP6Q0PNE2 266 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 MAMLD1Q13495 774 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 MTM1Q13496 603 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 IHHQ14623 411 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 ELOCQ15369 112 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 ZSCAN23Q3MJ62 389 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 CERCAMQ5T4B2 595 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 PLEKHA7Q6IQ23 1121 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 ESRP1Q6NXG1 681 aaKnown RBP8.99□□□□□ -0.97
TPM3-201ENST00000271850 LVRNQ6Q4G3 990 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 CLEC17AQ6ZS10 378 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 RAB11FIP2Q7L804 512 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 TRIM46Q7Z4K8 759 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 SPRED1Q7Z699 444 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 SRLQ86TD4 932 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 C17orf82Q86X59 251 aaPredicted RBP8.99□□□□□ -0.97
TPM3-201ENST00000271850 CBARPQ8N350 705 aaPredicted RBP8.99□□□□□ -0.97
TPM3-201ENST00000271850 PGBD5Q8N414 524 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 HTR3CQ8WXA8 447 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 WDR92Q96MX6 357 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 ERGIC2Q96RQ1 377 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 CNPY3Q9BT09 278 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 LRRN3Q9H3W5 708 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 SYNDIG1Q9H7V2 258 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 EPB41L5Q9HCM4 733 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 ETNK2Q9NVF9 386 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 EVA1BQ9NVM1 165 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 KLQ9UEF7 1012 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 APPL1Q9UKG1 709 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 AP4E1Q9UPM8 1137 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 PCDHGA7Q9Y5G6 932 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 SPTA1P02549 2419 aa8.99□□□□□ -0.97
TPM3-201ENST00000271850 SDK2Q58EX2 2172 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 PRAMEF33A0A0G2JMD5 474 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 A8MX80 341 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 B8ZZF3 427 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 J3QKU1 62 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 FGF10O15520 208 aaPredicted RBP8.98□□□□□ -0.97
TPM3-201ENST00000271850 TEX33O43247 280 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 B4GAT1O43505 415 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 PRAMEF10O60809 474 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 SOD1P00441 154 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms