RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RBM22Q9NW64 420 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CACNA1GO43497 2377 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 A0A087X1B8 175 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 PRRG1O14668 218 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 SYN3O14994 580 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 AKT1P31749 480 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CLCNKBP51801 687 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 RAB10P61026 200 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 TNK2Q07912 1038 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 VAC14Q08AM6 782 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 PLCL1Q15111 1095 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 SGO1Q5FBB7 561 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM171A1Q5VUB5 890 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CAPSLQ8WWF8 208 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 IRGQQ8WZA9 623 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 VPS33AQ96AX1 596 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 MRPL57Q9BQC6 102 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 HTATIP2Q9BUP3 242 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 LIMD1Q9UGP4 676 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 EVPLLA8MZ36 301 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CNOT3O75175 753 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CKBP12277 381 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 LBPP18428 481 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 NUMBP49757 651 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 ZNF846Q147U1 533 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 SLC9B1Q4ZJI4 515 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CDHR3Q6ZTQ4 885 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 MRPL10Q7Z7H8 261 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 TMEM110Q86TL2 294 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM126BQ8IXS8 530 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 ATP6V0D2Q8N8Y2 350 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CMASQ8NFW8 434 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 OR2T34Q8NGX1 318 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 OR2T3Q8NH03 318 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 PRKD2Q9BZL6 878 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CEP44Q9C0F1 390 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 C6orf62Q9GZU0 229 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 TUBA8Q9NY65 449 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 TJP2Q9UDY2 1190 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 ADAMTS6Q9UKP5 1117 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CAB39Q9Y376 341 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 GMEB1Q9Y692 573 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 MRPL42Q9Y6G3 142 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM189A1O60320 539 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 TSPAN8P19075 237 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 CHRM3P20309 590 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 LIMK2P53671 638 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 RAB15P59190 212 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 OGDHQ02218 1023 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 RNF219Q5W0B1 726 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 ANKS3Q6ZW76 656 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 IGDCC3Q8IVU1 814 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 ZNF276Q8N554 614 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 SMG8Q8ND04 991 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 TRPV1Q8NER1 839 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 BPIFB6Q8NFQ5 453 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 MYLPFQ96A32 169 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 SEPT5Q99719 369 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 GPATCH1Q9BRR8 931 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 LIN28AQ9H9Z2 209 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 CASS4Q9NQ75 786 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 ABCC13Q9NSE7 274 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 ZNF358Q9NW07 568 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 MOSPD1Q9UJG1 213 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 A0A088AWK7 358 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 LINC00854A0A1B0GVQ3 168 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM149AA5PLN7 773 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 TUFMP49411 452 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 LSM3P62310 102 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 RAD51Q06609 339 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 CTBP1Q13363 440 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 TNFAIP8L3Q5GJ75 292 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 INTS6LQ5JSJ4 861 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 GALNT18Q6P9A2 607 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 BNIPLQ7Z465 357 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 EID3Q8N140 333 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 TWNKQ96RR1 684 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 CCDC106Q9BWC9 280 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 UGT2B28Q9BY64 529 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 RHOJQ9H4E5 214 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 RCOR3Q9P2K3 495 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 TPRKBQ9Y3C4 175 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 CEP290O15078 2479 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 TK2O00142 265 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 NFKB1P19838 968 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 BDNFP23560 247 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 RECQLP46063 649 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 ST13P50502 369 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 EPS8Q12929 822 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 TRIM32Q13049 653 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 PCID2Q5JVF3 399 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 FSTL4Q6MZW2 842 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 POTEHQ6S545 545 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 HPS1Q92902 700 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 CSPG4P5Q96PW8 444 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 SYTL2Q9HCH5 934 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 HPS4Q9NQG7 708 aa11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms