RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MAGED1Q9Y5V3 778 aaPredicted RBP16.85■□□□□ 0.29
SQLE-201ENST00000265896 CCL15-CCL14A0A0B4J2E2 113 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 GABRDO14764 452 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 SCAMP3O14828 347 aaKnown RBP16.84■□□□□ 0.29
SQLE-201ENST00000265896 XPOTO43592 962 aaKnown RBP16.84■□□□□ 0.29
SQLE-201ENST00000265896 H6PDO95479 791 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 RPS6KA2Q15349 733 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 NEDD8Q15843 81 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 CCL15Q16663 113 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 UGP2Q16851 508 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 DUS1LQ6P1R4 473 aaKnown RBP16.84■□□□□ 0.29
SQLE-201ENST00000265896 LINC00523Q86TU6 105 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 SETD3Q86TU7 594 aaPredicted RBP16.84■□□□□ 0.29
SQLE-201ENST00000265896 FIBCD1Q8N539 461 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 SHCBP1Q8NEM2 672 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 SLC16A10Q8TF71 515 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 NTAN1Q96AB6 310 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 ACOX2Q99424 681 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 FLRT1Q9NZU1 646 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 RSL24D1Q9UHA3 163 aaKnown RBP16.84■□□□□ 0.29
SQLE-201ENST00000265896 OAZ3Q9UMX2 235 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 DNAJC15Q9Y5T4 150 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 SBF1O95248 1867 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 ENPP3O14638 875 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 AP1G1O43747 822 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 KCTD21Q4G0X4 260 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 C2CD4AQ8NCU7 369 aaPredicted RBP16.84■□□□□ 0.29
SQLE-201ENST00000265896 OR13C4Q8NGS5 318 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 PSMG2Q969U7 264 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 C19orf60Q96EN9 201 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 RTP3Q9BQQ7 232 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 GSTO2Q9H4Y5 243 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 DUS2Q9NX74 493 aaKnown RBP16.84■□□□□ 0.29
SQLE-201ENST00000265896 MYRFQ9Y2G1 1151 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 ZNF711Q9Y462 761 aa16.84■□□□□ 0.29
SQLE-201ENST00000265896 THP07101 528 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 LTA4HP09960 611 aaKnown RBP16.83■□□□□ 0.29
SQLE-201ENST00000265896 KCNE1P15382 129 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 DDR2Q16832 855 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 TMEM259Q4ZIN3 620 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 ALFQ53S48 1182 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 TTC33Q6PID6 262 aaPredicted RBP16.83■□□□□ 0.29
SQLE-201ENST00000265896 OR13J1Q8NGT2 312 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 RDH11Q8TC12 318 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 ZFRQ96KR1 1074 aaKnown RBP16.83■□□□□ 0.29
SQLE-201ENST00000265896 MAP10Q9P2G4 905 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 FAF1Q9UNN5 650 aaPredicted RBP16.83■□□□□ 0.29
SQLE-201ENST00000265896 ST3GAL5Q9UNP4 418 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 KCNH4Q9UQ05 1017 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 VWA7Q9Y334 891 aa16.83■□□□□ 0.29
SQLE-201ENST00000265896 ARL5CA6NH57 179 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 TRIM24O15164 1050 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 GPR39O43194 453 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 PIM1P11309 404 aaPredicted RBP16.83■□□□□ 0.28
SQLE-201ENST00000265896 GFAPP14136 432 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 AGAP9Q5VTM2 703 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 GPR107Q5VW38 600 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 XKR5Q6UX68 686 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 ANKRD23Q86SG2 305 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 EPHX4Q8IUS5 362 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 MAGEE2Q8TD90 523 aaPredicted RBP16.83■□□□□ 0.28
SQLE-201ENST00000265896 HMCESQ96FZ2 354 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 SMARCD1Q96GM5 515 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 PPP1R10Q96QC0 940 aaKnown RBP16.83■□□□□ 0.28
SQLE-201ENST00000265896 SLC2A11Q9BYW1 496 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 RGS18Q9NS28 235 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 OSER1Q9NX31 292 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 ABI2Q9NYB9 513 aaPredicted RBP16.83■□□□□ 0.28
SQLE-201ENST00000265896 BCAP29Q9UHQ4 241 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 DOLKQ9UPQ8 538 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 STRNO43815 780 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 PRKAA2P54646 552 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 STX1BP61266 288 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 POLD3Q15054 466 aaPredicted RBP16.83■□□□□ 0.28
SQLE-201ENST00000265896 DCLRE1AQ6PJP8 1040 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 MAELQ96JY0 434 aaKnown RBP16.83■□□□□ 0.28
SQLE-201ENST00000265896 CDK15Q96Q40 435 aa16.83■□□□□ 0.28
SQLE-201ENST00000265896 UXTQ9UBK9 157 aaPredicted RBP16.83■□□□□ 0.28
SQLE-201ENST00000265896 SLCO1B7G3V0H7 640 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 ANXA9O76027 345 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 HGFP14210 728 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 AGTR2P50052 363 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 ARPP19P56211 112 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 SCAPQ12770 1279 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 ISCA2Q86U28 154 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 RALGPS2Q86X27 583 aaPredicted RBP16.82■□□□□ 0.28
SQLE-201ENST00000265896 CATSPER1Q8NEC5 780 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 DPF3Q92784 378 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 DLG3Q92796 817 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 SLC9A7Q96T83 725 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 TREX1Q9NSU2 369 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 NEU3Q9UQ49 428 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 A0A0G2JMZ2 1700 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 LRRC37A2A6NM11 1700 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 COL1A2P08123 1366 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 TNS1Q9HBL0 1735 aaKnown RBP16.82■□□□□ 0.28
SQLE-201ENST00000265896 MYADML2A6NDP7 307 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 EI24O14681 340 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 MTSS1O43312 755 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms