RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TFEBP19484 476 aa8.8□□□□□ -1
VAPB-201ENST00000265619 ATP5OP48047 213 aa8.8□□□□□ -1
VAPB-201ENST00000265619 CDC20Q12834 499 aa8.8□□□□□ -1
VAPB-201ENST00000265619 LAMC2Q13753 1193 aa8.8□□□□□ -1
VAPB-201ENST00000265619 POU6F1Q14863 301 aa8.8□□□□□ -1
VAPB-201ENST00000265619 STXBP2Q15833 593 aa8.8□□□□□ -1
VAPB-201ENST00000265619 COLEC12Q5KU26 742 aa8.8□□□□□ -1
VAPB-201ENST00000265619 SDE2Q6IQ49 451 aa8.8□□□□□ -1
VAPB-201ENST00000265619 DNAJC24Q6P3W2 148 aa8.8□□□□□ -1
VAPB-201ENST00000265619 DDIASQ8IXT1 998 aa8.8□□□□□ -1
VAPB-201ENST00000265619 LSMEM2Q8N112 164 aa8.8□□□□□ -1
VAPB-201ENST00000265619 DHRSXQ8N5I4 330 aa8.8□□□□□ -1
VAPB-201ENST00000265619 IL17RDQ8NFM7 739 aa8.8□□□□□ -1
VAPB-201ENST00000265619 TRAPPC12Q8WVT3 735 aa8.8□□□□□ -1
VAPB-201ENST00000265619 SLC7A3Q8WY07 619 aa8.8□□□□□ -1
VAPB-201ENST00000265619 PEX13Q92968 403 aa8.8□□□□□ -1
VAPB-201ENST00000265619 EBNA1BP2Q99848 306 aaKnown RBP8.8□□□□□ -1
VAPB-201ENST00000265619 OR2B2Q9GZK3 357 aa8.8□□□□□ -1
VAPB-201ENST00000265619 SMOC2Q9H3U7 446 aa8.8□□□□□ -1
VAPB-201ENST00000265619 MOCS1Q9NZB8 636 aa8.8□□□□□ -1
VAPB-201ENST00000265619 PKD2L2Q9NZM6 624 aa8.8□□□□□ -1
VAPB-201ENST00000265619 CCDC167Q9P0B6 97 aa8.8□□□□□ -1
VAPB-201ENST00000265619 RWDD3Q9Y3V2 267 aa8.8□□□□□ -1
VAPB-201ENST00000265619 A8MUA0 341 aa8.79□□□□□ -1
VAPB-201ENST00000265619 TRDMT1O14717 391 aaKnown RBP8.79□□□□□ -1
VAPB-201ENST00000265619 TBX3O15119 743 aa8.79□□□□□ -1
VAPB-201ENST00000265619 CHADO15335 359 aa8.79□□□□□ -1
VAPB-201ENST00000265619 ZW10O43264 779 aa8.79□□□□□ -1
VAPB-201ENST00000265619 TADA2AO75478 443 aa8.79□□□□□ -1
VAPB-201ENST00000265619 FKBP9O95302 570 aa8.79□□□□□ -1
VAPB-201ENST00000265619 VNN1O95497 513 aa8.79□□□□□ -1
VAPB-201ENST00000265619 MSL3P1P0C860 447 aa8.79□□□□□ -1
VAPB-201ENST00000265619 KRT6CP48668 564 aa8.79□□□□□ -1
VAPB-201ENST00000265619 HUNKP57058 714 aa8.79□□□□□ -1
VAPB-201ENST00000265619 STX1BP61266 288 aa8.79□□□□□ -1
VAPB-201ENST00000265619 ADARB1P78563 741 aaKnown RBP8.79□□□□□ -1
VAPB-201ENST00000265619 IL1RL1Q01638 556 aa8.79□□□□□ -1
VAPB-201ENST00000265619 RFTN1Q14699 578 aaPredicted RBP8.79□□□□□ -1
VAPB-201ENST00000265619 HIST2H2ACQ16777 129 aaPredicted RBP8.79□□□□□ -1
VAPB-201ENST00000265619 CCNYL2Q5T2Q4 361 aa8.79□□□□□ -1
VAPB-201ENST00000265619 INTS11Q5TA45 600 aaKnown RBP8.79□□□□□ -1
VAPB-201ENST00000265619 LAIR2Q6ISS4 152 aa8.79□□□□□ -1
VAPB-201ENST00000265619 GDPD3Q7L5L3 318 aa8.79□□□□□ -1
VAPB-201ENST00000265619 PAGE2Q7Z2X7 111 aa8.79□□□□□ -1
VAPB-201ENST00000265619 LINC00523Q86TU6 105 aa8.79□□□□□ -1
VAPB-201ENST00000265619 GALNT12Q8IXK2 581 aa8.79□□□□□ -1
VAPB-201ENST00000265619 SMG8Q8ND04 991 aaKnown RBP8.79□□□□□ -1
VAPB-201ENST00000265619 SHCBP1Q8NEM2 672 aa8.79□□□□□ -1
VAPB-201ENST00000265619 HDAC10Q969S8 669 aa8.79□□□□□ -1
VAPB-201ENST00000265619 YME1L1Q96TA2 773 aa8.79□□□□□ -1
VAPB-201ENST00000265619 USP22Q9UPT9 525 aa8.79□□□□□ -1
VAPB-201ENST00000265619 SSC5DA1L4H1 1573 aa8.79□□□□□ -1
VAPB-201ENST00000265619 TOMM70O94826 608 aa8.79□□□□□ -1
VAPB-201ENST00000265619 RASAL1O95294 804 aa8.79□□□□□ -1
VAPB-201ENST00000265619 SBK3P0C264 359 aa8.79□□□□□ -1
VAPB-201ENST00000265619 CTRB1P17538 263 aa8.79□□□□□ -1
VAPB-201ENST00000265619 HTR2BP41595 481 aa8.79□□□□□ -1
VAPB-201ENST00000265619 ACTR2P61160 394 aa8.79□□□□□ -1
VAPB-201ENST00000265619 OSTNP61366 133 aa8.79□□□□□ -1
VAPB-201ENST00000265619 MRPS15P82914 257 aaKnown RBP8.79□□□□□ -1
VAPB-201ENST00000265619 SP2Q02086 613 aa8.79□□□□□ -1
VAPB-201ENST00000265619 GCNT1Q02742 428 aa8.79□□□□□ -1
VAPB-201ENST00000265619 MEP1AQ16819 746 aa8.79□□□□□ -1
VAPB-201ENST00000265619 OTUD3Q5T2D3 398 aaPredicted RBP8.79□□□□□ -1
VAPB-201ENST00000265619 LRRC38Q5VT99 294 aa8.79□□□□□ -1
VAPB-201ENST00000265619 SLX4IPQ5VYV7 408 aa8.79□□□□□ -1
VAPB-201ENST00000265619 SEL1L3Q68CR1 1132 aa8.79□□□□□ -1
VAPB-201ENST00000265619 CTRB2Q6GPI1 263 aa8.79□□□□□ -1
VAPB-201ENST00000265619 STXBP4Q6ZWJ1 553 aa8.79□□□□□ -1
VAPB-201ENST00000265619 TFAP2DQ7Z6R9 452 aa8.79□□□□□ -1
VAPB-201ENST00000265619 SLC51BQ86UW2 128 aa8.79□□□□□ -1
VAPB-201ENST00000265619 DHFR2Q86XF0 187 aa8.79□□□□□ -1
VAPB-201ENST00000265619 CCDC103Q8IW40 242 aa8.79□□□□□ -1
VAPB-201ENST00000265619 LRRC71Q8N4P6 559 aa8.79□□□□□ -1
VAPB-201ENST00000265619 ZNF606Q8WXB4 792 aa8.79□□□□□ -1
VAPB-201ENST00000265619 CNDP2Q96KP4 475 aaKnown RBP8.79□□□□□ -1
VAPB-201ENST00000265619 HSFY1Q96LI6 401 aa8.79□□□□□ -1
VAPB-201ENST00000265619 MAGEB5Q9BZ81 275 aa8.79□□□□□ -1
VAPB-201ENST00000265619 DNAI2Q9GZS0 605 aa8.79□□□□□ -1
VAPB-201ENST00000265619 UNC93B1Q9H1C4 597 aa8.79□□□□□ -1
VAPB-201ENST00000265619 RSAD1Q9HA92 442 aa8.79□□□□□ -1
VAPB-201ENST00000265619 PDGFCQ9NRA1 345 aa8.79□□□□□ -1
VAPB-201ENST00000265619 SNX15Q9NRS6 342 aa8.79□□□□□ -1
VAPB-201ENST00000265619 CPA4Q9UI42 421 aa8.79□□□□□ -1
VAPB-201ENST00000265619 TMCC3Q9ULS5 477 aa8.79□□□□□ -1
VAPB-201ENST00000265619 ARID2Q68CP9 1835 aa8.79□□□□□ -1
VAPB-201ENST00000265619 APOC4-APOC2K7ER74 178 aa8.79□□□□□ -1
VAPB-201ENST00000265619 ABCB7O75027 752 aa8.79□□□□□ -1
VAPB-201ENST00000265619 APOC2P02655 101 aa8.79□□□□□ -1
VAPB-201ENST00000265619 CHRM3P20309 590 aa8.79□□□□□ -1
VAPB-201ENST00000265619 PSMA2P25787 234 aa8.79□□□□□ -1
VAPB-201ENST00000265619 TYK2P29597 1187 aa8.79□□□□□ -1
VAPB-201ENST00000265619 PRKCEQ02156 737 aa8.79□□□□□ -1
VAPB-201ENST00000265619 C1QBPQ07021 282 aaKnown RBP8.79□□□□□ -1
VAPB-201ENST00000265619 NIPAL4Q0D2K0 466 aa8.79□□□□□ -1
VAPB-201ENST00000265619 TRIM71Q2Q1W2 868 aaKnown RBP8.79□□□□□ -1
VAPB-201ENST00000265619 C15orf59Q2T9L4 293 aaPredicted RBP8.79□□□□□ -1
VAPB-201ENST00000265619 CTU2Q2VPK5 515 aaKnown RBP8.79□□□□□ -1
VAPB-201ENST00000265619 BRDTQ58F21 947 aaPredicted RBP8.79□□□□□ -1
VAPB-201ENST00000265619 ZBTB41Q5SVQ8 909 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms