RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 FRA10AC1Q70Z53 315 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 CATSPER1Q8NEC5 780 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 DBF4BQ8NFT6 615 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 HEXDCQ8WVB3 486 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 ADGRE3Q9BY15 652 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 SRRDQ9UH36 339 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 H0Y626 953 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 J3KR12 359 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 CHRNGP07510 517 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 HOXC8P31273 242 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 RBM44Q6ZP01 1051 aaKnown RBP16.34■□□□□ 0.21
CTCF-201ENST00000264010 ARHGAP12Q8IWW6 846 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 UMODL1-AS1Q8N2C9 162 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 PCYOX1LQ8NBM8 494 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 TMEM169Q96HH4 297 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 CDRT15Q96T59 188 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 RNF112Q9ULX5 631 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 NELFEP18615 380 aaKnown RBP16.34■□□□□ 0.21
CTCF-201ENST00000264010 CLCN2P51788 898 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 CTC1Q2NKJ3 1217 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 AGKQ53H12 422 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 CNSTQ6PJW8 725 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 RNF19BQ6ZMZ0 732 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 CIR1Q86X95 450 aaPredicted RBP16.34■□□□□ 0.21
CTCF-201ENST00000264010 CFAP52Q8N1V2 620 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 CAPSLQ8WWF8 208 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 GFM2Q969S9 779 aaKnown RBP16.34■□□□□ 0.21
CTCF-201ENST00000264010 EME1Q96AY2 570 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 SLC7A8Q9UHI5 535 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 PACSIN3Q9UKS6 424 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 VPS26AO75436 327 aa16.33■□□□□ 0.21
CTCF-201ENST00000264010 HNRNPLP14866 589 aaKnown RBP eCLIP16.33■□□□□ 0.215e-8■□□□□ 10.7
CTCF-201ENST00000264010 SLC9B1Q4ZJI4 515 aa16.33■□□□□ 0.21
CTCF-201ENST00000264010 LPCAT1Q8NF37 534 aa16.33■□□□□ 0.21
CTCF-201ENST00000264010 CD99L2Q8TCZ2 262 aa16.33■□□□□ 0.21
CTCF-201ENST00000264010 PLAC1Q9HBJ0 212 aa16.33■□□□□ 0.21
CTCF-201ENST00000264010 TMEM248Q9NWD8 314 aa16.33■□□□□ 0.21
CTCF-201ENST00000264010 DNAJB4Q9UDY4 337 aa16.33■□□□□ 0.21
CTCF-201ENST00000264010 TRMT6Q9UJA5 497 aaKnown RBP16.33■□□□□ 0.21
CTCF-201ENST00000264010 C1orf232A0A0U1RR37 186 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 NPHS1O60500 1241 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 CAPN1P07384 714 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 EPGNQ6UW88 154 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 ZNF554Q86TJ5 538 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 LENG8Q96PV6 779 aaPredicted RBP16.33■□□□□ 0.2
CTCF-201ENST00000264010 YIPF2Q9BWQ6 316 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 OXCT2Q9BYC2 517 aaPredicted RBP16.33■□□□□ 0.2
CTCF-201ENST00000264010 TAS2R13Q9NYV9 303 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 SUN2Q9UH99 717 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 F8W810 466 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 TSPAN3O60637 253 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 PQBP1O60828 265 aaKnown RBP16.33■□□□□ 0.2
CTCF-201ENST00000264010 CNTN5O94779 1100 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 C1QAP02745 245 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 PIRTP0C851 137 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 GLT6D1Q7Z4J2 308 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 STYXQ8WUJ0 223 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 B3GALT6Q96L58 329 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 MRGPRX2Q96LB1 330 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 GPR63Q9BZJ6 419 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 LSM7Q9UK45 103 aaKnown RBP16.33■□□□□ 0.2
CTCF-201ENST00000264010 PRPF19Q9UMS4 504 aaKnown RBP16.33■□□□□ 0.2
CTCF-201ENST00000264010 PKP3Q9Y446 797 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 TLL2Q9Y6L7 1015 aa16.33■□□□□ 0.2
CTCF-201ENST00000264010 CD3EAPO15446 510 aaKnown RBP16.32■□□□□ 0.2
CTCF-201ENST00000264010 IPO13O94829 963 aaKnown RBP16.32■□□□□ 0.2
CTCF-201ENST00000264010 MBL2P11226 248 aaPredicted RBP16.32■□□□□ 0.2
CTCF-201ENST00000264010 CHRM3P20309 590 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 NEK2P51955 445 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 ACTR3P61158 418 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 GALNT3Q14435 633 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 LSM12Q3MHD2 195 aaKnown RBP16.32■□□□□ 0.2
CTCF-201ENST00000264010 AARS2Q5JTZ9 985 aaKnown RBP16.32■□□□□ 0.2
CTCF-201ENST00000264010 PIK3R6Q5UE93 754 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 MSANTD2Q6P1R3 559 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 APLFQ8IW19 511 aaPredicted RBP16.32■□□□□ 0.2
CTCF-201ENST00000264010 MAP3K13O43283 966 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 DLX3O60479 287 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 FOXD4Q12950 439 aaPredicted RBP16.32■□□□□ 0.2
CTCF-201ENST00000264010 PTK2BQ14289 1009 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 RBBP7Q16576 425 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 TLDC1Q6P9B6 456 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 LPCAT2Q7L5N7 544 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 DENND1CQ8IV53 801 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 HERC6Q8IVU3 1022 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 C2CD4AQ8NCU7 369 aaPredicted RBP16.32■□□□□ 0.2
CTCF-201ENST00000264010 TBATAQ96M53 351 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 HAUS8Q9BT25 410 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 TRMOQ9BU70 441 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 TRIM15Q9C019 465 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 KLHL4Q9C0H6 718 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 NOL6Q9H6R4 1146 aaKnown RBP16.32■□□□□ 0.2
CTCF-201ENST00000264010 DTNAQ9Y4J8 743 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 PLXNA1Q9UIW2 1896 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 SYCE1LA8MT33 242 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 ANGPT2O15123 496 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 ACSL4O60488 711 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 KRT8P05787 483 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 ME2P23368 584 aa16.32■□□□□ 0.2
CTCF-201ENST00000264010 ADSLP30566 484 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms