RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 POU4F1Q01851 419 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 FRG1Q14331 258 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 ADRM1Q16186 407 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 GPRC5AQ8NFJ5 357 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 FCRL2Q96LA5 508 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 C1orf50Q9BV19 199 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 ADI1Q9BV57 179 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 FAM124BQ9H5Z6 455 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 TMEM165Q9HC07 324 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 RGS18Q9NS28 235 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 A0A1W2PPW3 197 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 PTGESO14684 152 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 TRIM24O15164 1050 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 HMBSP08397 361 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 BRCC3P46736 316 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 CDKN2DP55273 166 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 ATP1A4Q13733 1029 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 INPP5AQ14642 412 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 RABL3Q5HYI8 236 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 DENND5AQ6IQ26 1287 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 TMEM26Q6ZUK4 368 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 TMEM126BQ8IUX1 230 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 ERI1Q8IV48 349 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 TOP6BLQ8N6T0 577 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 ISOC1Q96CN7 298 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 TMEM209Q96SK2 561 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 SLC9A7Q96T83 725 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 HBEGFQ99075 208 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 NAA50Q9GZZ1 169 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 UTP6Q9NYH9 597 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 MARCH4Q9P2E8 410 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 USP22Q9UPT9 525 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 PPP2R3BQ9Y5P8 575 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 SBF1O95248 1867 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 GJB3O75712 270 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 F9P00740 461 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 POMCP01189 267 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 PCNAP12004 261 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 HGFP14210 728 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 FASP25445 335 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 RPL34P49207 117 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 SCNN1GP51170 649 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 ARSDP51689 593 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 NAA20P61599 178 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 TXNL4AP83876 142 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 DSC2Q02487 901 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 C2CD4AQ8NCU7 369 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 C3orf58Q8NDZ4 430 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 MAELQ96JY0 434 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 MRGPRX2Q96LB1 330 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 TMEM74Q96NL1 305 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 VTA1Q9NP79 307 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 DUS2Q9NX74 493 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 IPO11Q9UI26 975 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 FAM50BQ9Y247 325 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 VWA7Q9Y334 891 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 COL1A2P08123 1366 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 SUPT3HB4E1H0 165 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 TSPAN3O60637 253 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 B3GAT3O94766 335 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 PRSS56P0CW18 603 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 CAPN3P20807 821 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 YWHAHQ04917 246 aaPredicted RBP12.41□□□□□ -0.42
CHMP3-201ENST00000263856 NFYCQ13952 458 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 ACBD5Q5T8D3 534 aaPredicted RBP12.41□□□□□ -0.42
CHMP3-201ENST00000263856 FUNDC1Q8IVP5 155 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 SMG8Q8ND04 991 aaKnown RBP12.41□□□□□ -0.42
CHMP3-201ENST00000263856 GIPC3Q8TF64 312 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 KCTD13Q8WZ19 329 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 MCMBPQ9BTE3 642 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 MAF1Q9H063 256 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 MUC3BQ9H195 1237 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 MEAF6Q9HAF1 191 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 SLC8A2Q9UPR5 921 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 ZFC3H1O60293 1989 aaKnown RBP12.41□□□□□ -0.42
CHMP3-201ENST00000263856 A0A087WXM4 84 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 PSMD3O43242 534 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 B4GAT1O43505 415 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 MAFKO60675 156 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 ATP6V1G1O75348 118 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 RBP1P09455 135 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 PGFP49763 221 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 EMP3P54852 163 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 TPD52P55327 224 aaPredicted RBP12.41□□□□□ -0.42
CHMP3-201ENST00000263856 PLA2G4EQ3MJ16 856 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 DCLRE1AQ6PJP8 1040 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 NLGN2Q8NFZ4 835 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 TWIST2Q8WVJ9 160 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 SMARCD1Q96GM5 515 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 FAR2Q96K12 515 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 TBATAQ96M53 351 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 GSTO2Q9H4Y5 243 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 ENTPD7Q9NQZ7 604 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 NDUFAF1Q9Y375 327 aa12.41□□□□□ -0.42
CHMP3-201ENST00000263856 J3KR12 359 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 NOL3O60936 208 aaKnown RBP12.4□□□□□ -0.42
CHMP3-201ENST00000263856 DIO3P55073 304 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 SH3BP2P78314 561 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 PFKPQ01813 784 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms