RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 BAIAP2Q9UQB8 552 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 NKRFO15226 690 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTPN4-201ENST00000263708 ZBTB6Q15916 424 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 RFX7Q2KHR2 1363 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 MINDY4Q4G0A6 757 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 FAM46CQ5VWP2 391 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 ADGRG6Q86SQ4 1221 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 ZBTB46Q86UZ6 589 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 ZDHHC17Q8IUH5 632 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 HCAR2Q8TDS4 363 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 SNX33Q8WV41 574 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 GJD4Q96KN9 370 aaPredicted RBP11.4□□□□□ -0.58
PTPN4-201ENST00000263708 KCNF1Q9H3M0 494 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 ZMPSTE24O75844 475 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 SCGB1D2O95969 90 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 NT5EP21589 574 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 AXLP30530 894 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 SSTR1P30872 391 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 AFTPHQ6ULP2 937 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 QSOX2Q6ZRP7 698 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 BEND5Q7L4P6 421 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 PRICKLE1Q96MT3 831 aaPredicted RBP11.4□□□□□ -0.58
PTPN4-201ENST00000263708 ADAM7Q9H2U9 754 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 C3orf14Q9HBI5 128 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 PCDHGB5Q9Y5G0 923 aa11.4□□□□□ -0.58
PTPN4-201ENST00000263708 PDHXO00330 501 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 CCZ1BP86790 482 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 CCZ1P86791 482 aaPredicted RBP11.4□□□□□ -0.59
PTPN4-201ENST00000263708 WASHC2DQ5SRD0 308 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 C9orf131Q5VYM1 1079 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 P4HA3Q7Z4N8 544 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 SUN3Q8TAQ9 357 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 GAL3ST4Q96RP7 486 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 TPK1Q9H3S4 243 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 C3orf18Q9UK00 162 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 DUSP10Q9Y6W6 482 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 RFXANKO14593 260 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 FFAR2O15552 330 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 FAM228BP0C875 321 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 PSMB4P28070 264 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 CREMQ03060 361 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 C9orf64Q5T6V5 341 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 FAM151BQ6UXP7 276 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 LZTR1Q8N653 840 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 ARL10Q8N8L6 244 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 ART5Q96L15 291 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 ELAC1Q9H777 363 aaKnown RBP11.4□□□□□ -0.59
PTPN4-201ENST00000263708 SPAG4Q9NPE6 437 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 EXD2Q9NVH0 621 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 PARPBPQ9NWS1 579 aa11.4□□□□□ -0.59
PTPN4-201ENST00000263708 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.4□□□□□ -0.59
PTPN4-201ENST00000263708 RIIAD1A6NNX1 92 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 HACD1B0YJ81 288 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 KRT36O76013 467 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 DHFRP00374 187 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 GPD2P43304 727 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 ENPEPQ07075 957 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 TC2NQ8N9U0 490 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 TEFMQ96QE5 360 aaKnown RBP11.39□□□□□ -0.59
PTPN4-201ENST00000263708 GAS2L1Q99501 681 aaPredicted RBP11.39□□□□□ -0.59
PTPN4-201ENST00000263708 OSBPL11Q9BXB4 747 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 SGK2Q9HBY8 427 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 ZSCAN5BA6NJL1 495 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 L7N2F9 121 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 IGKV5-2P06315 115 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 AP2S1P53680 142 aaPredicted RBP11.39□□□□□ -0.59
PTPN4-201ENST00000263708 VAMP2P63027 116 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 FSTL5Q8N475 847 aaPredicted RBP11.39□□□□□ -0.59
PTPN4-201ENST00000263708 PPP1R14BQ96C90 147 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 ZC3H10Q96K80 434 aaKnown RBP11.39□□□□□ -0.59
PTPN4-201ENST00000263708 ZNF350Q9GZX5 532 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 MED28Q9H204 178 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 MLXQ9UH92 298 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 CDH7Q9ULB5 785 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 IFT52Q9Y366 437 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 SNRPB2P08579 225 aaKnown RBP11.39□□□□□ -0.59
PTPN4-201ENST00000263708 ANPEPP15144 967 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 SDC2P34741 201 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 PTPN9P43378 593 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 PPP3CAQ08209 521 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 GPR107Q5VW38 600 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 CHSY3Q70JA7 882 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 ELOA2Q8IYF1 753 aaPredicted RBP11.39□□□□□ -0.59
PTPN4-201ENST00000263708 AADATQ8N5Z0 425 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 B3GALT6Q96L58 329 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 GFM1Q96RP9 751 aaKnown RBP11.39□□□□□ -0.59
PTPN4-201ENST00000263708 IL22Q9GZX6 179 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 DDX20Q9UHI6 824 aaKnown RBP11.39□□□□□ -0.59
PTPN4-201ENST00000263708 ADGRL2O95490 1459 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 LRIG2O94898 1065 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 ADH1CP00326 375 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 MAN2A2P49641 1150 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 TLR1Q15399 786 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 TMEM199Q8N511 208 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 HTRA1Q92743 480 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 SLC6A15Q9H2J7 730 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 ENY2Q9NPA8 101 aa11.39□□□□□ -0.59
PTPN4-201ENST00000263708 MTF2Q9Y483 593 aaPredicted RBP11.39□□□□□ -0.59
PTPN4-201ENST00000263708 NEDD8-MDP1E9PL57 170 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms