RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 IDH2P48735 452 aaKnown RBP16.9■□□□□ 0.3
CROCCP3-201ENST00000263511 TIMM50Q3ZCQ8 353 aa16.9■□□□□ 0.3
CROCCP3-201ENST00000263511 TEX44Q53QW1 395 aa16.9■□□□□ 0.3
CROCCP3-201ENST00000263511 MIEF2Q96C03 454 aa16.9■□□□□ 0.3
CROCCP3-201ENST00000263511 PTCD3Q96EY7 689 aaKnown RBP16.9■□□□□ 0.3
CROCCP3-201ENST00000263511 PDZD7Q9H5P4 517 aa16.9■□□□□ 0.3
CROCCP3-201ENST00000263511 CHKBQ9Y259 395 aa16.9■□□□□ 0.3
CROCCP3-201ENST00000263511 SLC9A8Q9Y2E8 581 aa16.9■□□□□ 0.3
CROCCP3-201ENST00000263511 ARHGEF28Q8N1W1 1705 aaKnown RBP16.89■□□□□ 0.3
CROCCP3-201ENST00000263511 PSME3P61289 254 aa16.89■□□□□ 0.3
CROCCP3-201ENST00000263511 ELP6Q0PNE2 266 aa16.89■□□□□ 0.3
CROCCP3-201ENST00000263511 PACS1Q6VY07 963 aa16.89■□□□□ 0.3
CROCCP3-201ENST00000263511 PHYKPLQ8IUZ5 450 aa16.89■□□□□ 0.3
CROCCP3-201ENST00000263511 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.3
CROCCP3-201ENST00000263511 KREMEN1Q96MU8 473 aa16.89■□□□□ 0.3
CROCCP3-201ENST00000263511 PPP1R11O60927 126 aaPredicted RBP16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 HTR7P34969 479 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 SLC5A3P53794 718 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 ATP12AP54707 1039 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 FUT2Q10981 343 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 PDK4Q16654 411 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 ZNF697Q5TEC3 545 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 ZCCHC7Q8N3Z6 543 aaKnown RBP16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 MREGQ8N565 214 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 DNAJB14Q8TBM8 379 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 ZNF398Q8TD17 642 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 BTBD9Q96Q07 612 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 IMP3Q9NV31 184 aaKnown RBP16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 CLIC5Q9NZA1 410 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 COG5Q9UP83 839 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 BCL9LQ86UU0 1499 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 RGSL1A5PLK6 1076 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 C5orf60A6NFR6 353 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 TSPAN1O60635 241 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 TSPAN8P19075 237 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 YBEYP58557 167 aaPredicted RBP16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 NOMO1Q15155 1222 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 ANXA8L1Q5VT79 327 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 CAPNS2Q96L46 248 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 CSPG4P5Q96PW8 444 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 FANCEQ9HB96 536 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 KCND1Q9NSA2 647 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 ZNF780BQ9Y6R6 833 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 A0A087WXM4 84 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 PNMA8CA0A1B0GUJ8 204 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 CCL16O15467 120 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 RHOQP17081 205 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 TNK2Q07912 1038 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 TRIM40Q6P9F5 258 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 CHSY3Q70JA7 882 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 UBE2R2Q712K3 238 aaPredicted RBP16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 XYLT1Q86Y38 959 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 OFCC1Q8IZS5 231 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 STK32AQ8WU08 396 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 MAML3Q96JK9 1138 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 CPXM1Q96SM3 734 aa16.89■□□□□ 0.29
CROCCP3-201ENST00000263511 TCRBV9S1A1TA0A576 114 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 PRMT5O14744 637 aaPredicted RBP16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 SYN3O14994 580 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 PDE9AO76083 593 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 GRIA3P42263 894 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 TTC23Q5W5X9 447 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 SCIMPQ6UWF3 145 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 C17orf64Q86WR6 236 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 PANX1Q96RD7 426 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 RHOJQ9H4E5 214 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 EFR3BQ9Y2G0 817 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 SEPT4O43236 478 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 SLC25A12O75746 678 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 FSBPO95073 299 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 NUDT17P0C025 328 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 ARL2P36404 184 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 CAPN13Q6MZZ7 669 aaPredicted RBP16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 RINLQ6ZS11 566 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 PARGQ86W56 976 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 RP9Q8TA86 221 aaKnown RBP16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 TRAPPC9Q96Q05 1148 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 ABCG4Q9H172 646 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 FAM124BQ9H5Z6 455 aaPredicted RBP16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 GGA2Q9UJY4 613 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 C15orf41Q9Y2V0 281 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 TRIM43BA6NCK2 446 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 RCCD1A6NED2 376 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 MAP2K7O14733 419 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 SNX3O60493 162 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 TACR2P21452 398 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 C4orf32Q8N8J7 132 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 POP5Q969H6 163 aaKnown RBP16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 FAM84AQ96KN4 292 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 INTS7Q9NVH2 962 aaKnown RBP16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 PCDHB1Q9Y5F3 818 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 GLYATL1P3A0A0U1RQE8 302 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 GTPBP1O00178 669 aaKnown RBP16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 SERPINB7O75635 380 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 RPP40O75818 363 aaKnown RBP16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 NEK5Q6P3R8 708 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 FUT10Q6P4F1 479 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 NPAS4Q8IUM7 802 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 SYT17Q9BSW7 474 aa16.88■□□□□ 0.29
CROCCP3-201ENST00000263511 TRMOQ9BU70 441 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms