RNA–Protein interactions for RNA: ENST00000262803.9

UPF1-201, Transcript of UPF1, RNA helicase and ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF1, Length 5,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-201ENST00000262803 BMP7P18075 431 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 LLGL2Q6P1M3 1020 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 C2orf15Q8WU43 125 aaKnown RBP19.19■□□□□ 0.66
UPF1-201ENST00000262803 BTN2A3PQ96KV6 586 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 IRF6O14896 467 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 NOL4O94818 638 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 ERCC2P18074 760 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 LAPTM5Q13571 262 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 ZNF57Q68EA5 555 aaPredicted RBP19.19■□□□□ 0.66
UPF1-201ENST00000262803 TATDN1Q6P1N9 297 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 C12orf29Q8N999 325 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 JOSD2Q8TAC2 188 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 KCTD4Q8WVF5 259 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 MYO19Q96H55 970 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 MAP10Q9P2G4 905 aa19.19■□□□□ 0.66
UPF1-201ENST00000262803 RPL26L1Q9UNX3 145 aaKnown RBP19.19■□□□□ 0.66
UPF1-201ENST00000262803 CXCL14O95715 111 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 IDO1P14902 403 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 MTAPQ13126 283 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 UBAP2LQ14157 1087 aaKnown RBP19.18■□□□□ 0.66
UPF1-201ENST00000262803 CBX2Q14781 532 aaPredicted RBP19.18■□□□□ 0.66
UPF1-201ENST00000262803 PROSER1Q86XN7 944 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 IL1BP01584 269 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 ELFN1P0C7U0 828 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 ZBTB48P10074 688 aaPredicted RBP19.18■□□□□ 0.66
UPF1-201ENST00000262803 TFEBP19484 476 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 UGT1A5P35504 534 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 ATP1A4Q13733 1029 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 XKR6Q5GH73 641 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.18■□□□□ 0.66
UPF1-201ENST00000262803 RGSL1A5PLK6 1076 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 IFNGP01579 166 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 NR2F1P10589 423 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 QPCTQ16769 361 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 ADGRG2Q8IZP9 1017 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 CCNB1IP1Q9NPC3 277 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 TRAFD1O14545 582 aaPredicted RBP19.18■□□□□ 0.66
UPF1-201ENST00000262803 PSME3P61289 254 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 ARMC8Q8IUR7 673 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 PHYKPLQ8IUZ5 450 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 CHPFQ8IZ52 775 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 FBXW8Q8N3Y1 598 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 OR4L1Q8NH43 312 aa19.18■□□□□ 0.66
UPF1-201ENST00000262803 TLR5O60602 858 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 LCA5LO95447 670 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 SERPINA6P08185 405 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 HGFP14210 728 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 GRIA3P42263 894 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 TTC27Q6P3X3 843 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 RHBGQ9H310 441 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 ERVW-1Q9UQF0 538 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 GTPBP1O00178 669 aaKnown RBP19.17■□□□□ 0.66
UPF1-201ENST00000262803 MMP8P22894 467 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 TGFBR2P37173 567 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 GPR180Q86V85 440 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 SLC22A17Q8WUG5 538 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 FAXDC2Q96IV6 333 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 FERD3LQ96RJ6 166 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 LRRC4CQ9HCJ2 640 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 SPAG4Q9NPE6 437 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 PEX11AO75192 247 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 COL6A2P12110 1019 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 RCVRNP35243 200 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 GABRB2P47870 512 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 PTPRNQ16849 979 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 LIPMQ5VYY2 423 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 CAPN13Q6MZZ7 669 aaPredicted RBP19.17■□□□□ 0.66
UPF1-201ENST00000262803 DHDDSQ86SQ9 333 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 TNS4Q8IZW8 715 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 SMYD1Q8NB12 490 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 ZNF214Q9UL59 606 aaPredicted RBP19.17■□□□□ 0.66
UPF1-201ENST00000262803 R3HDM2Q9Y2K5 976 aaKnown RBP19.17■□□□□ 0.66
UPF1-201ENST00000262803 ISM1B1AKI9 464 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 SNAP91O60641 907 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 PRNPP04156 253 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 GJB1P08034 283 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 SNHG28P0DPA3 235 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 ABL2P42684 1182 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 CHN2P52757 468 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 PRKG2Q13237 762 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 SLC25A52Q3SY17 297 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 NDNQ99608 321 aa19.17■□□□□ 0.66
UPF1-201ENST00000262803 YDJCA8MPS7 323 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 TRIM38O00635 465 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 CD52P31358 61 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 YBEYP58557 167 aaPredicted RBP19.16■□□□□ 0.66
UPF1-201ENST00000262803 ATP13A5Q4VNC0 1218 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 CERS6Q6ZMG9 384 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 GPR135Q8IZ08 494 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 CYP4X1Q8N118 509 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 ASZ1Q8WWH4 475 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 MECRQ9BV79 373 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 SLC17A7Q9P2U7 560 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 DAPK2Q9UIK4 370 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 CORO1CQ9ULV4 474 aaPredicted RBP19.16■□□□□ 0.66
UPF1-201ENST00000262803 SYN3O14994 580 aa19.16■□□□□ 0.66
UPF1-201ENST00000262803 ANPEPP15144 967 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms