RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 PLIN3O60664 434 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 USP12O75317 370 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 PRH1P02810 166 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 CYP1A1P04798 512 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-202ENST00000262676 ZBTB48P10074 688 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-202ENST00000262676 BUD31P41223 144 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-202ENST00000262676 GALNT3Q14435 633 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 DHDDSQ86SQ9 333 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 TRAPPC5Q8IUR0 188 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 ADGRG2Q8IZP9 1017 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 SFRP1Q8N474 314 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 KLHL23Q8NBE8 558 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 MCFD2Q8NI22 146 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 C11orf24Q96F05 449 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-202ENST00000262676 ATP13A1Q9HD20 1204 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 EXD2Q9NVH0 621 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 RIC1Q4ADV7 1423 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 OR14I1A6ND48 311 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 SNAP91O60641 907 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 RAMP2O60895 175 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 ARFIP1P53367 373 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 VBP1P61758 197 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 MYBPC3Q14896 1274 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 SNAP47Q5SQN1 464 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 GPR156Q8NFN8 814 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 SETD6Q8TBK2 473 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 ZDHHC6Q9H6R6 413 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 XPR1Q9UBH6 696 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 AK5Q9Y6K8 562 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 FAM240BA0A1B0GVZ2 78 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 CYP2C18P33260 490 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 MCL1Q07820 350 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 PAGE2BQ5JRK9 111 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 PPP1R26Q5T8A7 1209 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-202ENST00000262676 TRIM40Q6P9F5 258 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 SERPINA13PQ6UXR4 307 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 OAFQ86UD1 273 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 MED28Q9H204 178 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 TPK1Q9H3S4 243 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 C17orf75Q9HAS0 396 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 SPAG4Q9NPE6 437 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 RAPGEFL1Q9UHV5 662 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 VPS4AQ9UN37 437 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 PLAGL2Q9UPG8 496 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 PLCL2Q9UPR0 1127 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 G3V2T6 193 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 TEX46H3BTG2 121 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 CA12O43570 354 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 USP17L7P0C7H9 530 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 HNF4AP41235 474 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 RPL5P46777 297 aaKnown RBP12.89□□□□□ -0.35
TTC39A-202ENST00000262676 PSME3P61289 254 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 ROR2Q01974 943 aaKnown RBP12.89□□□□□ -0.35
TTC39A-202ENST00000262676 CCL14Q16627 93 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 SETMARQ53H47 684 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-202ENST00000262676 FAAH2Q6GMR7 532 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 PYHIN1Q6K0P9 492 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 ZNF433Q8N7K0 673 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-202ENST00000262676 SPATA20Q8TB22 786 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 CLK4Q9HAZ1 481 aaKnown RBP12.89□□□□□ -0.35
TTC39A-202ENST00000262676 PNPLA3Q9NST1 481 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 DMTF1Q9Y222 760 aa12.89□□□□□ -0.35
TTC39A-202ENST00000262676 A0A088AWK7 358 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 TOP3BO95985 862 aaKnown RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ZNF10P21506 573 aaPredicted RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 UGT1A5P35504 534 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 TAS2R41P59536 307 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 GRB10Q13322 594 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 USP41Q3LFD5 358 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ATAT1Q5SQI0 421 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 LRRC20Q8TCA0 184 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 PTCD2Q8WV60 388 aaKnown RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 BORCS5Q969J3 196 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 DGCR14Q96DF8 476 aaKnown RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 C1GALT1C1Q96EU7 318 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 KCNS3Q9BQ31 491 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 SNX7Q9UNH6 387 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 SLIT1O75093 1534 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 SCN2BO60939 215 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 MICAL2O94851 1124 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 GNRH1P01148 92 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ITGA2P17301 1181 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 NDST1P52848 882 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 TBX2Q13207 712 aaPredicted RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 RAB43Q86YS6 212 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 C4orf19Q8IY42 314 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 UBE2J2Q8N2K1 259 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ZNF366Q8N895 744 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 MAB21L3Q8N8X9 362 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 EIF1ADQ8N9N8 165 aaKnown RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 CDK5RAP1Q96SZ6 601 aaKnown RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 CHIAQ9BZP6 476 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 IL25Q9H293 177 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 SEC13P55735 322 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 CRADDP78560 199 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 PTPN20Q4JDL3 420 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 MTX3Q5HYI7 312 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 FBXL19Q6PCT2 694 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms