RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 SAPCD2Q86UD0 394 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 RTN4RL1Q86UN2 441 aaPredicted RBP22.68■■□□□ 1.22
MCF2L-201ENST00000261963 SLX1AQ9BQ83 275 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 ATP13A1Q9HD20 1204 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 CNOT11Q9UKZ1 510 aaKnown RBP22.68■■□□□ 1.22
MCF2L-201ENST00000261963 TLR6Q9Y2C9 796 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 XRCC1P18887 633 aaPredicted RBP22.68■■□□□ 1.22
MCF2L-201ENST00000261963 PAMP19021 973 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 THOP1P52888 689 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 OXCT1P55809 520 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 GSTM4Q03013 218 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 SPIDRQ14159 915 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 BTG3Q14201 252 aaPredicted RBP22.68■■□□□ 1.22
MCF2L-201ENST00000261963 IHHQ14623 411 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 ZNF789Q5FWF6 425 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 FAM26DQ5JW98 314 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 MSANTD2Q6P1R3 559 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 CNSTQ6PJW8 725 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 TFAP2DQ7Z6R9 452 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 CHERPQ8IWX8 916 aaKnown RBP22.68■■□□□ 1.22
MCF2L-201ENST00000261963 UMODL1-AS1Q8N2C9 162 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 DLG3Q92796 817 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 CDRT15Q96T59 188 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 MRPL46Q9H2W6 279 aaKnown RBP22.68■■□□□ 1.22
MCF2L-201ENST00000261963 ARNT2Q9HBZ2 717 aa22.68■■□□□ 1.22
MCF2L-201ENST00000261963 PRDM5Q9NQX1 630 aaPredicted RBP22.68■■□□□ 1.22
MCF2L-201ENST00000261963 J3KR12 359 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 H6PDO95479 791 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 RAB15P59190 212 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 ZNF423Q2M1K9 1284 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 RBM20Q5T481 1227 aaKnown RBP22.67■■□□□ 1.22
MCF2L-201ENST00000261963 MON1AQ86VX9 555 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 KYQ8NBH2 561 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 TXNDC5Q8NBS9 432 aaKnown RBP22.67■■□□□ 1.22
MCF2L-201ENST00000261963 BHLHE22Q8NFJ8 381 aaPredicted RBP22.67■■□□□ 1.22
MCF2L-201ENST00000261963 HEXDCQ8WVB3 486 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 HMCESQ96FZ2 354 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 IMP4Q96G21 291 aaKnown RBP22.67■■□□□ 1.22
MCF2L-201ENST00000261963 PRKD2Q9BZL6 878 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 FNIP2Q9P278 1114 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 RNF11Q9Y3C5 154 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 PRSS51A0A1B0GVH4 220 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 TRIM43BA6NCK2 446 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 OAZ2O95190 189 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 SLC10A3P09131 477 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 HAPLN1P10915 354 aaPredicted RBP22.67■■□□□ 1.22
MCF2L-201ENST00000261963 DSC1Q08554 894 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 TMEM198Q66K66 360 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 STON2Q8WXE9 905 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 NT5MQ9NPB1 228 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 IGSF5Q9NSI5 407 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.67■■□□□ 1.22
MCF2L-201ENST00000261963 HTTP42858 3142 aa22.67■■□□□ 1.22
MCF2L-201ENST00000261963 CNTN5O94779 1100 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 CCND3P30281 292 aaPredicted RBP22.66■■□□□ 1.22
MCF2L-201ENST00000261963 GRK4P32298 578 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 MAXP61244 160 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 ALFQ53S48 1182 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 CLLU1OSQ5K130 101 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 SNX32Q86XE0 403 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 CPSF7Q8N684 471 aaKnown RBP22.66■■□□□ 1.22
MCF2L-201ENST00000261963 KDM1BQ8NB78 822 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 KLHL5Q96PQ7 755 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 EPS15L1Q9UBC2 864 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 VTI1BQ9UEU0 232 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 VPS28Q9UK41 221 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 MYO16Q9Y6X6 1858 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 CPB1P15086 417 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 POU4F1Q01851 419 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 SLC10A7Q0GE19 358 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 PIGGQ5H8A4 983 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 MS4A13Q5J8X5 152 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 DSELQ8IZU8 1212 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 CCNYL1Q8N7R7 359 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 PNPLA1Q8N8W4 532 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 SGF29Q96ES7 293 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 COX4I2Q96KJ9 171 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 OLFM1Q99784 485 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 MRPL57Q9BQC6 102 aaKnown RBP22.66■■□□□ 1.22
MCF2L-201ENST00000261963 GMIPQ9P107 970 aa22.66■■□□□ 1.22
MCF2L-201ENST00000261963 A0A087X1B8 175 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 TMEM233B4DJY2 109 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 MMP2P08253 660 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 MSX2P35548 267 aaPredicted RBP22.65■■□□□ 1.22
MCF2L-201ENST00000261963 NDST2P52849 883 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 TBX4P57082 545 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 TXNL4AP83876 142 aaKnown RBP22.65■■□□□ 1.22
MCF2L-201ENST00000261963 RELAQ04206 551 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 ELMSAN1Q6PJG2 1045 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 PDCD6IPQ8WUM4 868 aaKnown RBP22.65■■□□□ 1.22
MCF2L-201ENST00000261963 ZNF512Q96ME7 567 aaPredicted RBP22.65■■□□□ 1.22
MCF2L-201ENST00000261963 RANBP9Q96S59 729 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 CAAP1Q9H8G2 361 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 TBC1D23Q9NUY8 699 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 CDYLQ9Y232 598 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 MYRFQ9Y2G1 1151 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 HEATR9A2RTY3 570 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 RGSL1A5PLK6 1076 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 NEMP2A6NFY4 417 aa22.65■■□□□ 1.22
MCF2L-201ENST00000261963 SLCO1B7G3V0H7 640 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms