RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 RHOBTB1O94844 696 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 GOLGA6DP0CG33 693 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 DHPSP49366 369 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 GDF10P55107 478 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 PPP2CBP62714 309 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 PPP2CAP67775 309 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 SLC7A5Q01650 507 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 BRD3Q15059 726 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 SPDYCQ5MJ68 293 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 ARHGEF18Q6ZSZ5 1173 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 PRPF39Q86UA1 669 aaKnown RBP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 CADM4Q8NFZ8 388 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 IMP4Q96G21 291 aaKnown RBP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 SPATA13Q96N96 652 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 PARD6BQ9BYG5 372 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 FRMD8Q9BZ67 464 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 FOXP3Q9BZS1 431 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 ANKZF1Q9H8Y5 726 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 GLOD4Q9HC38 313 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 GOLGA6AQ9NYA3 693 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 KLHL8Q9P2G9 620 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 MTRF1LQ9UGC7 380 aaKnown RBP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 DMGDHQ9UI17 866 aaKnown RBP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 TPX2Q9ULW0 747 aaKnown RBP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 ITM2BQ9Y287 266 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 RAI2Q9Y5P3 530 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 FADS3Q9Y5Q0 445 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 V9GYY5 206 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 TBC1D3DA0A087WVF3 549 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TBC1D3IA0A087WXS9 549 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TBC1D3EA0A087X179 549 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TBC1D3KA0A087X1G2 549 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TBC1D3FA6NER0 549 aaPredicted RBP11.63□□□□□ -0.55
PFDN1-201ENST00000261813 UPK3BL1B0FP48 263 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TBC1D3LB9A6J9 549 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 UPK3BL2E5RIL1 263 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 AREL1O15033 823 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 PSMD3O43242 534 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 FZD6O60353 706 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 SOCS5O75159 536 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 FSBPO95073 299 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 EPN2O95208 641 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 PRKCGP05129 697 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 IGHV4-34P06331 123 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TBC1D3HP0C7X1 549 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 NFKB1P19838 968 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 CES1P23141 567 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 FDFT1P37268 417 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 CD86P42081 329 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 SARNPP82979 210 aaKnown RBP11.63□□□□□ -0.55
PFDN1-201ENST00000261813 CCDC15Q0P6D6 951 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 GPS1Q13098 491 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 PRPSAP1Q14558 356 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 UGP2Q16851 508 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 PARP6Q2NL67 630 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 CFAP58Q5T655 872 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 KIAA0895LQ68EN5 471 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TBC1D3GQ6DHY5 549 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 LAIR1Q6GTX8 287 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TBC1D3CQ6IPX1 549 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 BRAT1Q6PJG6 821 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 PID1Q7Z2X4 250 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TTC7BQ86TV6 843 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TBC1D3Q8IZP1 549 aaPredicted RBP11.63□□□□□ -0.55
PFDN1-201ENST00000261813 ARMC2Q8NEN0 867 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 SPATA22Q8NHS9 363 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 PDCD6IPQ8WUM4 868 aaKnown RBP11.63□□□□□ -0.55
PFDN1-201ENST00000261813 RAB7BQ96AH8 199 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TADA1Q96BN2 335 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 BIRC7Q96CA5 298 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 RBM15Q96T37 977 aaKnown RBP eCLIP11.63□□□□□ -0.551e-6■■■■□ 21.5
PFDN1-201ENST00000261813 ORAI3Q9BRQ5 295 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 TDRD1Q9BXT4 1180 aaKnown RBP11.63□□□□□ -0.55
PFDN1-201ENST00000261813 PCED1AQ9H1Q7 454 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 SLC25A51Q9H1U9 297 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 PREBQ9HCU5 417 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 DLL3Q9NYJ7 618 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 NCDNQ9UBB6 729 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 RAB23Q9ULC3 237 aa11.63□□□□□ -0.55
PFDN1-201ENST00000261813 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.63□□□□□ -0.55
PFDN1-201ENST00000261813 ATXN2Q99700 1313 aaKnown RBP11.63□□□□□ -0.55
PFDN1-201ENST00000261813 NUMA1Q14980 2115 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 TNRC6BQ9UPQ9 1833 aaKnown RBP11.62□□□□□ -0.55
PFDN1-201ENST00000261813 DMXL1Q9Y485 3027 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 CCDC151A5D8V7 595 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 ERI2A8K979 691 aaKnown RBP11.62□□□□□ -0.55
PFDN1-201ENST00000261813 MEI4A8MW99 385 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 F5H423 210 aaPredicted RBP11.62□□□□□ -0.55
PFDN1-201ENST00000261813 DYNC1I1O14576 645 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 AP1G1O43747 822 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 RNGTTO60942 597 aaKnown RBP11.62□□□□□ -0.55
PFDN1-201ENST00000261813 PGLSO95336 258 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 MT-CYBP00156 380 aaPredicted RBP11.62□□□□□ -0.55
PFDN1-201ENST00000261813 CPP00450 1065 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 PRLP01236 227 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 PDHA1P08559 390 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 SERPINF2P08697 491 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 ITPKAP23677 461 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms