RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SIRPB2Q5JXA9 342 aa16.41■□□□□ 0.22
TM9SF1-201ENST00000261789 C6orf10Q5SRN2 563 aa16.41■□□□□ 0.22
TM9SF1-201ENST00000261789 FUNDC1Q8IVP5 155 aa16.41■□□□□ 0.22
TM9SF1-201ENST00000261789 PGBD5Q8N414 524 aa16.41■□□□□ 0.22
TM9SF1-201ENST00000261789 TRIM8Q9BZR9 551 aa16.41■□□□□ 0.22
TM9SF1-201ENST00000261789 SUCOQ9UBS9 1254 aaKnown RBP16.41■□□□□ 0.22
TM9SF1-201ENST00000261789 PTPRDP23468 1912 aa16.41■□□□□ 0.22
TM9SF1-201ENST00000261789 NLRC5Q86WI3 1866 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 COL4A4P53420 1690 aaPredicted RBP16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 NRP2O60462 931 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 CAPNS1P04632 268 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 RBP1P09455 135 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 PRSS56P0CW18 603 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 GRK4P32298 578 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 SLC7A2P52569 658 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 RHDQ02161 417 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 ZNF678Q5SXM1 525 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 LARP4Q71RC2 724 aaKnown RBP eCLIP16.4■□□□□ 0.221e-7■□□□□ 9.5
TM9SF1-201ENST00000261789 RETREG3Q86VR2 466 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 CALML6Q8TD86 181 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 NSUN5Q96P11 429 aaKnown RBP16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 KCNA7Q96RP8 456 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 ARNT2Q9HBZ2 717 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 ATP13A1Q9HD20 1204 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 DDX18Q9NVP1 670 aaKnown RBP16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 RNF11Q9Y3C5 154 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 ARL5AQ9Y689 179 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 TRPM7Q96QT4 1865 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 TDRD15B5MCY1 1934 aaKnown RBP16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 ZNF839A8K0R7 811 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 M0QZQ0 153 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 TIPRLO75663 272 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 C8BP07358 591 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 HMBSP08397 361 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 CKMT2P17540 419 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 IMPDH1P20839 514 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 RENBPP51606 427 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 USP46P62068 366 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 UNC50Q53HI1 259 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 HMBOX1Q6NT76 420 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 AHI1Q8N157 1196 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 THEM5Q8N1Q8 247 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 SCML4Q8N228 414 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 TRPV1Q8NER1 839 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 PPWD1Q96BP3 646 aaKnown RBP16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 CCDC126Q96EE4 140 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 ZNF512Q96ME7 567 aaPredicted RBP16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 ADAM2Q99965 735 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 SP110Q9HB58 689 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 RGS18Q9NS28 235 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 CD300AQ9UGN4 299 aa16.4■□□□□ 0.22
TM9SF1-201ENST00000261789 RPL10P27635 214 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 YWHAHQ04917 246 aaPredicted RBP16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 DYNC1I2Q13409 638 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 IKBKEQ14164 716 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 GEN1Q17RS7 908 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 ZNF549Q6P9A3 640 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 MRPL10Q7Z7H8 261 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 MIB1Q86YT6 1006 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 BLOC1S5Q8TDH9 187 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 IGSF8Q969P0 613 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 C19orf60Q96EN9 201 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 FAR2Q96K12 515 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 ZNF696Q9H7X3 374 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 AKTIPQ9H8T0 292 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 POLR3BQ9NW08 1133 aaPredicted RBP16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 CROTQ9UKG9 612 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 MYO16Q9Y6X6 1858 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 A0A1B0GTL3 188 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 GPR182O15218 404 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 SOAT2O75908 522 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 PSMC3P17980 439 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 EFEMP1Q12805 493 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 SEMA3AQ14563 771 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 KIF19Q2TAC6 998 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 MS4A13Q5J8X5 152 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 BEND5Q7L4P6 421 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 AFAP1L2Q8N4X5 818 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 TSPAN17Q96FV3 270 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 TRIM62Q9BVG3 475 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 MRPS26Q9BYN8 205 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 SLC2A11Q9BYW1 496 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 DNAJC15Q9Y5T4 150 aa16.39■□□□□ 0.21
TM9SF1-201ENST00000261789 ANKRD12Q6UB98 2062 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 LAMA2P24043 3122 aaKnown RBP16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 MROH6A6NGR9 719 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 UBXN8O00124 270 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 PLOD2O00469 737 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 NR5A2O00482 541 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 LDB2O43679 373 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 CHRM3P20309 590 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 SOX11P35716 441 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 GRIA3P42263 894 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 PSMD8P48556 350 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 INHBCP55103 352 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 TIAL1Q01085 375 aaKnown RBP eCLIP16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 TUSC3Q13454 348 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 GALNT3Q14435 633 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 GRB7Q14451 532 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 SLC14A2Q15849 920 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms