RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 BRSK2Q8IWQ3 736 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 HORMAD2Q8N7B1 307 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 ZBTB8BQ8NAP8 495 aaPredicted RBP5.12□□□□□ -1.59
TRA2B-201ENST00000259043 FAR1Q8WVX9 515 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 ADAMTS14Q8WXS8 1223 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 KTI12Q96EK9 354 aaPredicted RBP5.12□□□□□ -1.59
TRA2B-201ENST00000259043 PPP1R10Q96QC0 940 aaKnown RBP5.12□□□□□ -1.59
TRA2B-201ENST00000259043 MEIS3Q99687 375 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 TWSG1Q9GZX9 223 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.12□□□□□ -1.594e-11■□□□□ 8.6
TRA2B-201ENST00000259043 SLCO5A1Q9H2Y9 848 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 CD93Q9NPY3 652 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 WASH6PQ9NQA3 447 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 THAP1Q9NVV9 213 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 MAP3K20Q9NYL2 800 aaKnown RBP5.12□□□□□ -1.59
TRA2B-201ENST00000259043 WNT16Q9UBV4 365 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 HACL1Q9UJ83 578 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 ABT1Q9ULW3 272 aaKnown RBP5.12□□□□□ -1.59
TRA2B-201ENST00000259043 RNF123Q5XPI4 1314 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 MRC1P22897 1456 aa5.12□□□□□ -1.59
TRA2B-201ENST00000259043 CCDC196A0A1B0GTZ2 297 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 TMEM247A6NEH6 219 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 LDB2O43679 373 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 KRT86O43790 486 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 HSP90AA1P07900 732 aaKnown RBP5.11□□□□□ -1.59
TRA2B-201ENST00000259043 HSP90AB1P08238 724 aaKnown RBP5.11□□□□□ -1.59
TRA2B-201ENST00000259043 MYZAPP0CAP1 466 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 CYP4B1P13584 511 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 MT3P25713 68 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 HOXD3P31249 432 aaPredicted RBP5.11□□□□□ -1.59
TRA2B-201ENST00000259043 AVPR1AP37288 418 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 ENTPD1P49961 510 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 RPS6KA3P51812 740 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 EIF5P55010 431 aaKnown RBP5.11□□□□□ -1.59
TRA2B-201ENST00000259043 TMPRSS3P57727 454 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 ACTR2P61160 394 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 G3BP1Q13283 466 aaKnown RBP eCLIP5.11□□□□□ -1.592e-7■□□□□ 10.7
TRA2B-201ENST00000259043 SLC39A6Q13433 755 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 KRT81Q14533 505 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 HNF4GQ14541 408 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 ZNF284Q2VY69 593 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 DNTTIP2Q5QJE6 756 aaKnown RBP5.11□□□□□ -1.59
TRA2B-201ENST00000259043 HYIQ5T013 277 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 OTUD1Q5VV17 481 aaPredicted RBP5.11□□□□□ -1.59
TRA2B-201ENST00000259043 RETSATQ6NUM9 610 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 AADACL2Q6P093 401 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 ZNF530Q6P9A1 599 aaPredicted RBP5.11□□□□□ -1.59
TRA2B-201ENST00000259043 ZDHHC23Q8IYP9 409 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 FSIP1Q8NA03 581 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 CSGALNACT1Q8TDX6 532 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 AFG1LQ8WV93 481 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 APOLD1Q96LR9 279 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 SLC26A6Q9BXS9 759 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 CADM1Q9BY67 442 aaKnown RBP5.11□□□□□ -1.59
TRA2B-201ENST00000259043 CATSPERBQ9H7T0 1116 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 ACAD9Q9H845 621 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 FZD10Q9ULW2 581 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 PROCRQ9UNN8 238 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 ICKQ9UPZ9 632 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 RAP2CQ9Y3L5 183 aa5.11□□□□□ -1.59
TRA2B-201ENST00000259043 EYA2O00167 538 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 HSPB6O14558 160 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 HOXC11O43248 304 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-201ENST00000259043 SOX30O94993 753 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 CKMT1AP12532 417 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 TNFAIP3P21580 790 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 ELF1P32519 619 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 KRT9P35527 623 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 MAP2K2P36507 400 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 PNPLA4P41247 253 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 PCYT1AP49585 367 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 MCM2P49736 904 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 TRPC3Q13507 836 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 THOC5Q13769 683 aaKnown RBP5.1□□□□□ -1.59
TRA2B-201ENST00000259043 SIM2Q14190 667 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-201ENST00000259043 PLEKHO1Q53GL0 409 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-201ENST00000259043 FAAH2Q6GMR7 532 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 FAM83HQ6ZRV2 1179 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-201ENST00000259043 USP43Q70EL4 1123 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-201ENST00000259043 HERC6Q8IVU3 1022 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 ESX1Q8N693 406 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 SCAIQ8N9R8 606 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 NEXN-AS1Q8NBZ9 246 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 CEP76Q8TAP6 659 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 MED30Q96HR3 178 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 ZNF333Q96JL9 665 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 FAM84BQ96KN1 310 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-201ENST00000259043 NOD2Q9HC29 1040 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 RASSF1Q9NS23 344 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 IFT80Q9P2H3 777 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-201ENST00000259043 HDAC6Q9UBN7 1215 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 CDH22Q9UJ99 828 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 FEM1BQ9UK73 627 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 SCINQ9Y6U3 715 aa5.1□□□□□ -1.59
TRA2B-201ENST00000259043 ITIH6Q6UXX5 1313 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 MS4A18H0YCH9 400 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 SYN3O14994 580 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 RNMTO43148 476 aaKnown RBP5.09□□□□□ -1.59
TRA2B-201ENST00000259043 CLDN7O95471 211 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms