RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 SHROOM3Q8TF72 1996 aa12.97□□□□□ -0.33
APOBEC3A-201ENST00000249116 CELSR3Q9NYQ7 3312 aa12.97□□□□□ -0.33
APOBEC3A-201ENST00000249116 PLD2O14939 933 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 RECQL5O94762 991 aaPredicted RBP12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 SERPING1P05155 500 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 RPLP0P05388 317 aaKnown RBP12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 TPM1P09493 284 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 RGRP47804 291 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 SCNN1BP51168 640 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 ZNF75DP51815 510 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 PDX1P52945 283 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 INHBCP55103 352 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 AP1S1P61966 158 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 PPP6R3Q5H9R7 873 aaPredicted RBP12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 AFMIDQ63HM1 303 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 LIPIQ6XZB0 460 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 TAF8Q7Z7C8 310 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 ZSWIM9Q86XI8 627 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 ZNF843Q8N446 348 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 FBXO39Q8N4B4 442 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 LZTR1Q8N653 840 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 FNIP1Q8TF40 1166 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 SNRNP27Q8WVK2 155 aaKnown RBP12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 ECHDC3Q96DC8 303 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 MRFAP1L1Q96HT8 127 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 KCTD15Q96SI1 283 aaPredicted RBP12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 DNAJC7Q99615 494 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 ZWILCHQ9H900 591 aa12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 BZW2Q9Y6E2 419 aaKnown RBP12.96□□□□□ -0.33
APOBEC3A-201ENST00000249116 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 A0A1W2PQ67 120 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 TMEM191CA6NGB0 347 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 D6RAR5 112 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 K7ENP7 123 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 PDE2AO00408 941 aaPredicted RBP12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 DDX3XO00571 662 aaKnown RBP eCLIP12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 TNFRSF10CO14798 259 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 MFAP3LO75121 409 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 HOXC4P09017 264 aaPredicted RBP12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 GZMAP12544 262 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 NFKBIAP25963 317 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 HNRNPH3P31942 346 aaKnown RBP12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 HCAR3P49019 387 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 CCL7P80098 99 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 RALGDSQ12967 914 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 LBRQ14739 615 aaKnown RBP12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 TSR1Q2NL82 804 aaKnown RBP12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 INO80CQ6PI98 192 aaPredicted RBP12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 PCSK4Q6UW60 755 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 CCDC81Q6ZN84 652 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 DPPA4Q7L190 304 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 RAB11FIP2Q7L804 512 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 ARHGAP12Q8IWW6 846 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 ARFGAP1Q8N6T3 406 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 PLA2G15Q8NCC3 412 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 GPR156Q8NFN8 814 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 FUBP1Q96AE4 644 aaKnown RBP12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 PDXPQ96GD0 296 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 ZNF599Q96NL3 588 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 PEBP4Q96S96 227 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 LRRN3Q9H3W5 708 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 ABHD10Q9NUJ1 306 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 KCTD5Q9NXV2 234 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 SEPT3Q9UH03 358 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 SCINQ9Y6U3 715 aa12.96□□□□□ -0.34
APOBEC3A-201ENST00000249116 COL27A1Q8IZC6 1860 aaPredicted RBP12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 FASNP49327 2511 aaKnown RBP12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 PMS2P1A4D2B8 440 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 CASC3O15234 703 aaKnown RBP12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 FTLP02792 175 aaPredicted RBP12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 PNLIPP16233 465 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 GLB1P16278 677 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 MIPP30301 263 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 CCKBRP32239 447 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 UGT1A5P35504 534 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 TBX2Q13207 712 aaPredicted RBP12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 ZNF235Q14590 738 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 ACOX1Q15067 660 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 TMCO4Q5TGY1 634 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 OGFOD3Q6PK18 319 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 ARHGAP36Q6ZRI8 547 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 JAMLQ86YT9 394 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 CCNJLQ8IV13 435 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 BBS5Q8N3I7 341 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 NPWQ8N729 165 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 FAM46DQ8NEK8 389 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 OR1E3Q8WZA6 343 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 TRIM11Q96F44 468 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 PSKH2Q96QS6 385 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 WDR26Q9H7D7 661 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 FGF22Q9HCT0 170 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 MRPL47Q9HD33 250 aaKnown RBP12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 WDR70Q9NW82 654 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 CNOT8Q9UFF9 292 aaKnown RBP12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 MOSPD1Q9UJG1 213 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 PCDHGA7Q9Y5G6 932 aa12.95□□□□□ -0.34
APOBEC3A-201ENST00000249116 A0A1W2PQM1 296 aa12.94□□□□□ -0.34
APOBEC3A-201ENST00000249116 TMEM202A6NGA9 273 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms