RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 DDR2Q16832 855 aa21.7■■□□□ 1.06
SH2D3A-201ENST00000245908 FAM45BPQ6NSW5 357 aa21.7■■□□□ 1.06
SH2D3A-201ENST00000245908 SPATA24Q86W54 205 aa21.7■■□□□ 1.06
SH2D3A-201ENST00000245908 ATP6V0D2Q8N8Y2 350 aa21.7■■□□□ 1.06
SH2D3A-201ENST00000245908 FAM45AQ8TCE6 357 aa21.7■■□□□ 1.06
SH2D3A-201ENST00000245908 TOP1MTQ969P6 601 aa21.7■■□□□ 1.06
SH2D3A-201ENST00000245908 ALG9Q9H6U8 611 aa21.7■■□□□ 1.06
SH2D3A-201ENST00000245908 UXTQ9UBK9 157 aaPredicted RBP21.7■■□□□ 1.06
SH2D3A-201ENST00000245908 UBFD1O14562 309 aaKnown RBP21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 CRTAMO95727 393 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 ATXN3P54252 364 aaPredicted RBP21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 NFKB2Q00653 900 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 CACNB2Q08289 660 aaPredicted RBP21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 AGKQ53H12 422 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 ZNF678Q5SXM1 525 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 GPR158Q5T848 1215 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 ISCA2Q86U28 154 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 LDB1Q86U70 411 aaPredicted RBP21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 PGBD5Q8N414 524 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 PCDH20Q8N6Y1 951 aaKnown RBP21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 TMEM102Q8N9M5 508 aaPredicted RBP21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 FAM156AQ8NDB6 213 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 EPS15L1Q9UBC2 864 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 E7ENX8 843 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 CCL22O00626 93 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 TRIM24O15164 1050 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 LDB2O43679 373 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 ADAMTS4O75173 837 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 C8BP07358 591 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 SMIM18P0DKX4 95 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 TCN1P20061 433 aaPredicted RBP21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 PMLP29590 882 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 USP46P62068 366 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 ACVR1Q04771 509 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 ILF2Q12905 390 aaKnown RBP21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 TRIM25Q14258 630 aaKnown RBP21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 NFE2Q16621 373 aaPredicted RBP21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 IGSF8Q969P0 613 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 AP4B1Q9Y6B7 739 aa21.69■■□□□ 1.06
SH2D3A-201ENST00000245908 FRMPD3Q5JV73 1810 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 TTC24A2A3L6 582 aaPredicted RBP21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 GPC4O75487 556 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 ASGR1P07306 291 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 KCNC1P48547 511 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 HSPA13P48723 471 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 ATP4BP51164 291 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 CLCN2P51788 898 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 IL10RBQ08334 325 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 EFEMP1Q12805 493 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 MYBPC3Q14896 1274 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 CYHR1Q6ZMK1 362 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 ZNF280BQ86YH2 543 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 IFNL1Q8IU54 200 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 TRIB2Q92519 343 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 BTN2A3PQ96KV6 586 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 RGS18Q9NS28 235 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 UBAP1Q9NZ09 502 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 KCTD3Q9Y597 815 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 OR51F1A6NGY5 319 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 SNRPB2P08579 225 aaKnown RBP21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 FDXRP22570 491 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 DSC1Q08554 894 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 FAM26DQ5JW98 314 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 MFSD14CQ5VZR4 134 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 FBXL22Q6P050 247 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 LARP4Q71RC2 724 aaKnown RBP eCLIP21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 PIM3Q86V86 326 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 ZNF354CQ86Y25 554 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 SLC25A23Q9BV35 468 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 IL37Q9NZH6 218 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 CCDC167Q9P0B6 97 aa21.68■■□□□ 1.06
SH2D3A-201ENST00000245908 TMEM189-UBE2V1I3L0A0 370 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 RNASEH2AO75792 299 aaKnown RBP21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 GRK4P32298 578 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 ZNF157P51786 506 aaPredicted RBP21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 TRIP4Q15650 581 aaPredicted RBP21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 UNC50Q53HI1 259 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 EPB41L1Q9H4G0 881 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 HACD3Q9P035 362 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 CNOT11Q9UKZ1 510 aaKnown RBP21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 DRGXA6NNA5 263 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 SUPT7LO94864 414 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 TRAP1Q12931 704 aaKnown RBP21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 TRIM71Q2Q1W2 868 aaKnown RBP21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 RAP1GAP2Q684P5 730 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 CLEC6AQ6EIG7 209 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 PAOXQ6QHF9 649 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 HACD2Q6Y1H2 254 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 SH3RF2Q8TEC5 729 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 PEX13Q92968 403 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 PTERQ96BW5 349 aa21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 MTF2Q9Y483 593 aaPredicted RBP21.67■■□□□ 1.06
SH2D3A-201ENST00000245908 SMIM31A0A1B0GVY4 71 aa21.66■■□□□ 1.06
SH2D3A-201ENST00000245908 SEPT4O43236 478 aa21.66■■□□□ 1.06
SH2D3A-201ENST00000245908 RAMP2O60895 175 aa21.66■■□□□ 1.06
SH2D3A-201ENST00000245908 HOXB8P17481 243 aaPredicted RBP21.66■■□□□ 1.06
SH2D3A-201ENST00000245908 HDCP19113 662 aa21.66■■□□□ 1.06
SH2D3A-201ENST00000245908 MAGEA11P43364 429 aa21.66■■□□□ 1.06
SH2D3A-201ENST00000245908 HERVK_113P63132 956 aa21.66■■□□□ 1.06
SH2D3A-201ENST00000245908 SERINC3Q13530 473 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms