RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 LINGO1Q96FE5 620 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 KLHL28Q9NXS3 571 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 RPS6KA6Q9UK32 745 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 DGKBQ9Y6T7 804 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 BTN3A3O00478 584 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 NADKO95544 446 aaPredicted RBP19.91■□□□□ 0.78
SOX4-201ENST00000244745 GSTM5P46439 218 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 REP15Q6BDI9 236 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 DENND5AQ6IQ26 1287 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 EXOC2Q96KP1 924 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 KLHL5Q96PQ7 755 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 CHRAC1Q9NRG0 131 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 COL20A1Q9P218 1284 aa19.91■□□□□ 0.78
SOX4-201ENST00000244745 AGRPO00253 132 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 DARSP14868 501 aaKnown RBP19.9■□□□□ 0.78
SOX4-201ENST00000244745 GALNT18Q6P9A2 607 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 TXNDC11Q6PKC3 985 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 ZYG11AQ6WRX3 759 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 STRADAQ7RTN6 431 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 DENND1CQ8IV53 801 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 OFCC1Q8IZS5 231 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 CCDC185Q8N715 623 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 SLC4A11Q8NBS3 891 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 PCDH12Q9NPG4 1184 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 G3V2T6 193 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 PSMD11O00231 422 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 SLC22A3O75751 556 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 LDLRAP1Q5SW96 308 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 TPGS1Q6ZTW0 290 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 KBTBD8Q8NFY9 601 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 ARHGAP28Q9P2N2 729 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 RIPK3Q9Y572 518 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 NFAT5O94916 1531 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 CYP2A6P11509 494 aaPredicted RBP19.9■□□□□ 0.78
SOX4-201ENST00000244745 TM4SF1P30408 202 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 WNT3AP56704 352 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 DPP10Q8N608 796 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 C10orf82Q8WW14 230 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 HTRA1Q92743 480 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 OSBPL10Q9BXB5 764 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 DMAC2Q9NW81 257 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 H3BMM5 538 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 ALDH1A2O94788 518 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 IL6P05231 212 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 HSPA14Q0VDF9 509 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 ZC3H7AQ8IWR0 971 aaKnown RBP19.9■□□□□ 0.78
SOX4-201ENST00000244745 TFAP2BQ92481 460 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 ERLEC1Q96DZ1 483 aa19.9■□□□□ 0.78
SOX4-201ENST00000244745 TK2O00142 265 aa19.89■□□□□ 0.78
SOX4-201ENST00000244745 TREML2Q5T2D2 321 aa19.89■□□□□ 0.78
SOX4-201ENST00000244745 HECTD2Q5U5R9 776 aa19.89■□□□□ 0.78
SOX4-201ENST00000244745 LRRC52Q8N7C0 313 aa19.89■□□□□ 0.78
SOX4-201ENST00000244745 ZNF781Q8N8C0 355 aa19.89■□□□□ 0.78
SOX4-201ENST00000244745 CENPIQ92674 756 aaPredicted RBP19.89■□□□□ 0.78
SOX4-201ENST00000244745 GINS4Q9BRT9 223 aa19.89■□□□□ 0.78
SOX4-201ENST00000244745 DISP2A7MBM2 1401 aa19.89■□□□□ 0.78
SOX4-201ENST00000244745 BBIP1A8MTZ0 92 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 ULK1O75385 1050 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 ATP5C1P36542 298 aaKnown RBP19.89■□□□□ 0.77
SOX4-201ENST00000244745 MRPS6P82932 125 aaKnown RBP19.89■□□□□ 0.77
SOX4-201ENST00000244745 USP45Q70EL2 814 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 HIPK1Q86Z02 1210 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 GOLGA2P5Q9HBQ8 144 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 SPG21Q9NZD8 308 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 UXTQ9UBK9 157 aaPredicted RBP19.89■□□□□ 0.77
SOX4-201ENST00000244745 QPRTQ15274 297 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 POTEHQ6S545 545 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 PYROXD2Q8N2H3 581 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 TOP6BLQ8N6T0 577 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 MAB21L3Q8N8X9 362 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 IRF6O14896 467 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 CDC42P60953 191 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 ITGA7Q13683 1181 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 ZNF570Q96NI8 536 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 BBS4Q96RK4 519 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 KLHL31Q9H511 634 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 GLOD4Q9HC38 313 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 PCDHA2Q9Y5H9 948 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 PAGE1O75459 146 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 PYDC2Q56P42 97 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 DOK6Q6PKX4 331 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 ELMO1Q92556 727 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 ST6GALNAC4Q9H4F1 302 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 EBF2Q9HAK2 575 aa19.89■□□□□ 0.77
SOX4-201ENST00000244745 LRATO95237 230 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 CLTBP09497 229 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 MPP1Q00013 466 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 IRF8Q02556 426 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 PSMD5Q16401 504 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 EIF3MQ7L2H7 374 aaKnown RBP19.88■□□□□ 0.77
SOX4-201ENST00000244745 WDR48Q8TAF3 677 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 MYDGFQ969H8 173 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 DNAJC1Q96KC8 554 aaKnown RBP19.88■□□□□ 0.77
SOX4-201ENST00000244745 YME1L1Q96TA2 773 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 NKX1-2Q9UD57 310 aaPredicted RBP19.88■□□□□ 0.77
SOX4-201ENST00000244745 PCDH8O95206 1070 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 SERPINA4P29622 427 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 ARL2P36404 184 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 NUP62P37198 522 aaPredicted RBP19.88■□□□□ 0.77
SOX4-201ENST00000244745 AIF1P55008 147 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms