RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 DSC2Q02487 901 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 EFTUD2Q15029 972 aaKnown RBP eCLIP13.27□□□□□ -0.29
SLIRP-201ENST00000238688 TMEM196Q5HYL7 178 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 DGKKQ5KSL6 1271 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 CERCAMQ5T4B2 595 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 TSTD2Q5T7W7 516 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 FSTL4Q6MZW2 842 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 TRMT10BQ6PF06 316 aaKnown RBP13.27□□□□□ -0.29
SLIRP-201ENST00000238688 KYAT3Q6YP21 454 aaKnown RBP13.27□□□□□ -0.29
SLIRP-201ENST00000238688 SH2D5Q6ZV89 423 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 PGBD5Q8N414 524 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 BCAS4Q8TDM0 211 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 CKAP2Q8WWK9 683 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 EZH1Q92800 747 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-201ENST00000238688 TUBGCP5Q96RT8 1024 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 TRIB3Q96RU7 358 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 RBBP8Q99708 897 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 FAM126AQ9BYI3 521 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-201ENST00000238688 RHOJQ9H4E5 214 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 THG1LQ9NWX6 298 aaKnown RBP13.27□□□□□ -0.29
SLIRP-201ENST00000238688 UBP1Q9NZI7 540 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 DCDC2Q9UHG0 476 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 VPS51Q9UID3 782 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 MID2Q9UJV3 735 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 HS3ST2Q9Y278 367 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 VPS9D1Q9Y2B5 631 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 CXorf49A8MYA2 514 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-201ENST00000238688 NDUFAB1O14561 156 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 COPEO14579 308 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 SPTBN2O15020 2390 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 PFDN6O15212 129 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 TSPAN3O60637 253 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 GLRA3O75311 464 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 TMCC1O94876 653 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 MPOP05164 745 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 ITGA2BP08514 1039 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 ATXN1LP0C7T5 689 aaKnown RBP13.26□□□□□ -0.29
SLIRP-201ENST00000238688 COL6A2P12110 1019 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 TGM1P22735 817 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 NFKBIAP25963 317 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 CRHR1P34998 444 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 MAGEA12P43365 314 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 CXCL12P48061 93 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 CCR3P51677 355 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 SGSHP51688 502 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 CRADDP78560 199 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 ARF5P84085 180 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 DNAH14Q0VDD8 3507 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 MSLNQ13421 630 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-201ENST00000238688 LRRC32Q14392 662 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 E2F5Q15329 346 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 PDK4Q16654 411 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 PLEKHG6Q3KR16 790 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 SIRPB2Q5JXA9 342 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 TEDDM1Q5T9Z0 273 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 HHATQ5VTY9 493 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 WFIKKN2Q8TEU8 576 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 STYXQ8WUJ0 223 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 WBP2Q969T9 261 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 FCRL3Q96P31 734 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-201ENST00000238688 ZNF317Q96PQ6 595 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-201ENST00000238688 MCMBPQ9BTE3 642 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 TDRD1Q9BXT4 1180 aaKnown RBP13.26□□□□□ -0.29
SLIRP-201ENST00000238688 CHRAC1Q9NRG0 131 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 SMYD2Q9NRG4 433 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 C20orf96Q9NUD7 363 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-201ENST00000238688 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-201ENST00000238688 GRID1Q9ULK0 1009 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 ANKRD6Q9Y2G4 727 aa13.26□□□□□ -0.29
SLIRP-201ENST00000238688 F5H423 210 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-201ENST00000238688 KLF11O14901 512 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 BIRC5O15392 142 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 IGSF6O95976 241 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 GSRP00390 522 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 IL1BP01584 269 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 APOA4P06727 396 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 DHRS4L1P0CG22 281 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 GJA4P35212 333 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 CSKP41240 450 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 GRIA4P48058 902 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 ARCN1P48444 511 aaKnown RBP13.25□□□□□ -0.29
SLIRP-201ENST00000238688 NEK3P51956 506 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 RHOAP61586 193 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 MTM1Q13496 603 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 THOC5Q13769 683 aaKnown RBP13.25□□□□□ -0.29
SLIRP-201ENST00000238688 POU6F1Q14863 301 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 CYTH1Q15438 398 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 TAF1AQ15573 450 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-201ENST00000238688 GAB4Q2WGN9 574 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 EML3Q32P44 896 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 GKAP1Q5VSY0 366 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-201ENST00000238688 MICALCLQ6ZW33 695 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 KIAA2013Q8IYS2 634 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 NDUFAF2Q8N183 169 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 OR52K2Q8NGK3 314 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 GPR150Q8NGU9 434 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 OSCP1Q8WVF1 389 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 MFSD3Q96ES6 412 aa13.25□□□□□ -0.29
SLIRP-201ENST00000238688 LMLNQ96KR4 655 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms